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doc: Update contact information
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sellth committed Nov 1, 2023
1 parent 1009797 commit dc60c43
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Showing 16 changed files with 27 additions and 27 deletions.
4 changes: 2 additions & 2 deletions altamisa/constants/investigation_headers.py
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__author__ = (
"Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>, "
"Mathias Kuhring <mathias.kuhring@bihealth.de>"
"Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>, "
"Mathias Kuhring <mathias.kuhring@bih-charite.de>"
)


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4 changes: 2 additions & 2 deletions altamisa/constants/table_headers.py
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__author__ = (
"Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>, "
"Mathias Kuhring <mathias.kuhring@bihealth.de>"
"Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>, "
"Mathias Kuhring <mathias.kuhring@bih-charite.de>"
)


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4 changes: 2 additions & 2 deletions altamisa/constants/table_restrictions.py
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__author__ = (
"Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>, "
"Mathias Kuhring <mathias.kuhring@bihealth.de>"
"Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>, "
"Mathias Kuhring <mathias.kuhring@bih-charite.de>"
)


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4 changes: 2 additions & 2 deletions altamisa/constants/table_tokens.py
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__author__ = (
"Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>, "
"Mathias Kuhring <mathias.kuhring@bihealth.de>"
"Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>, "
"Mathias Kuhring <mathias.kuhring@bih-charite.de>"
)


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2 changes: 1 addition & 1 deletion altamisa/exceptions.py
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Exceptions and Warnings used in the AltamISA library.
"""

__author__ = "Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>"
__author__ = "Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>"


class IsaException(Exception):
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2 changes: 1 addition & 1 deletion altamisa/isatab/headers.py
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from ..exceptions import ParseIsatabException


__author__ = "Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>"
__author__ = "Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>"


class ColumnHeader:
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2 changes: 1 addition & 1 deletion altamisa/isatab/helpers.py
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from ..exceptions import ParseIsatabWarning


__author__ = "Mathias Kuhring <mathias.kuhring@bihealth.de>"
__author__ = "Mathias Kuhring <mathias.kuhring@bih-charite.de>"


def is_ontology_term_ref(v):
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2 changes: 1 addition & 1 deletion altamisa/isatab/models.py
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import attr


__author__ = "Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>"
__author__ = "Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>"


# Base types, used throughout -------------------------------------------------
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2 changes: 1 addition & 1 deletion altamisa/isatab/parse_assay_study.py
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from . import models


__author__ = "Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>"
__author__ = "Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>"


class _NodeBuilderBase:
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2 changes: 1 addition & 1 deletion altamisa/isatab/parse_investigation.py
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from . import models


__author__ = "Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>"
__author__ = "Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>"


# Helper function to extract comment headers and values from a section dict
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2 changes: 1 addition & 1 deletion altamisa/isatab/validate_assay_study.py
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from . import models


__author__ = "Mathias Kuhring <mathias.kuhring@bihealth.de>"
__author__ = "Mathias Kuhring <mathias.kuhring@bih-charite.de>"


# Constants to differentiate models when validating materials, processes or arcs
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2 changes: 1 addition & 1 deletion altamisa/isatab/validate_investigation.py
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from .validate_assay_study import _OntologyTermRefValidator


__author__ = "Mathias Kuhring <mathias.kuhring@bihealth.de>"
__author__ = "Mathias Kuhring <mathias.kuhring@bih-charite.de>"


# Pattern and helper functions for validation ------------------------------------------------------
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4 changes: 2 additions & 2 deletions altamisa/isatab/write_assay_study.py
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__author__ = (
"Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>, "
"Mathias Kuhring <mathias.kuhring@bihealth.de>"
"Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>, "
"Mathias Kuhring <mathias.kuhring@bih-charite.de>"
)


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4 changes: 2 additions & 2 deletions altamisa/isatab/write_investigation.py
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__author__ = (
"Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>, "
"Mathias Kuhring <mathias.kuhring@bihealth.de>"
"Manuel Holtgrewe <manuel.holtgrewe@bih-charite.de>, "
"Mathias Kuhring <mathias.kuhring@bih-charite.de>"
)


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10 changes: 5 additions & 5 deletions codemeta.json
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{
"@id": "https://orcid.org/0000-0002-3287-0313",
"@type": "Person",
"email": "mathias.kuhring@bihealth.de",
"email": "mathias.kuhring@bih-charite.de",
"name": "Mathias Kuhring",
"affiliation": "Berlin Institute of Health (BIH), Berlin, German"
},
{
"@id": "https://orcid.org/0000-0002-4180-8810",
"@type": "Person",
"email": "mikko.nieminen@bihealth.de",
"email": "mikko.nieminen@bih-charite.de",
"name": "Mikko Nieminen",
"affiliation": "Berlin Institute of Health (BIH), Berlin, German"
},
{
"@id": "https://orcid.org/0000-0002-5423-1651",
"@type": "Person",
"email": "jennifer.kirwan@bihealth.de",
"email": "jennifer.kirwan@bih-charite.de",
"name": "Jennifer Kirwan",
"affiliation": "Berlin Institute of Health (BIH), Berlin, German"
},
{
"@id": "https://orcid.org/0000-0002-3284-0632",
"@type": "Person",
"email": "dieter.beule@bihealth.de",
"email": "dieter.beule@bih-charite.de",
"name": "Dieter Beule",
"affiliation": "Berlin Institute of Health (BIH), Berlin, German"
},
{
"@id": "https://orcid.org/0000-0002-3051-1763",
"@type": "Person",
"email": "manuel.holtgrewe@bihealth.de",
"email": "manuel.holtgrewe@bih-charite.de",
"name": "Manuel Holtgrewe",
"affiliation": "Berlin Institute of Health (BIH), Berlin, German"
}
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4 changes: 2 additions & 2 deletions setup.py
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Expand Up @@ -35,8 +35,8 @@ def parse_requirements(path):
setup(
author="Dieter Beule, Jennifer Kirwan, Mathias Kuhring, Manuel Holtgrewe, Mikko Nieminen",
author_email=(
"dieter.beule@bihealth.de, jennifer.kirwan@bihalth.de, mathias.kuhring@bihealth.de, "
"manuel.holtgrewe@bihealth.de, mikko.nieminen@bihealth.de"
"dieter.beule@bih-charite.de, jennifer.kirwan@bihalth.de, mathias.kuhring@bih-charite.de, "
"manuel.holtgrewe@bih-charite.de, mikko.nieminen@bih-charite.de"
),
classifiers=[
"Development Status :: 4 - Beta",
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