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feat: transcript based annotation (#11) #14

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@holtgrewe holtgrewe linked an issue Mar 20, 2023 that may be closed by this pull request
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codecov bot commented Mar 20, 2023

Codecov Report

Patch coverage: 82.48% and project coverage change: +6.49 🎉

Comparison is base (f63f8c2) 72.43% compared to head (477aa62) 78.92%.

Additional details and impacted files
@@            Coverage Diff             @@
##             main      #14      +/-   ##
==========================================
+ Coverage   72.43%   78.92%   +6.49%     
==========================================
  Files           7       10       +3     
  Lines        1578     2591    +1013     
==========================================
+ Hits         1143     2045     +902     
- Misses        435      546     +111     
Impacted Files Coverage Δ
src/db/create/seqvar_freqs/serialized.rs 75.10% <ø> (ø)
src/main.rs 0.00% <0.00%> (ø)
src/annotate/seqvars/csq.rs 73.03% <73.03%> (ø)
src/annotate/seqvars/mod.rs 68.58% <75.86%> (ø)
src/db/create/txs/mod.rs 91.71% <83.87%> (ø)
src/db/create/seqvar_freqs/reading.rs 93.33% <84.61%> (+0.25%) ⬆️
src/annotate/seqvars/provider.rs 89.59% <89.59%> (ø)
src/annotate/seqvars/ann.rs 96.92% <96.92%> (ø)

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@holtgrewe holtgrewe merged commit 6677899 into main Mar 28, 2023
@holtgrewe holtgrewe deleted the 11-implement-transcript-based-annotation-of-sequence-variants branch March 28, 2023 12:13
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Implement transcript-based annotation of sequence variants
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