Import fix to CI

bihealth · Oct 28, 2022 · 14fd0e9 · 14fd0e9
1 parent 112f144
commit 14fd0e9
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diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -40,7 +40,8 @@ jobs:
           samtools version
           bcftools version
       - name: Install some more dependencies via pip
-        run: pip install -r requirements/test.txt
+        # Workaround - see https://github.com/pytest-dev/pytest/issues/10420#issuecomment-1290697849
+        run: pip install -r requirements/test.txt; pip install --ignore-installed py
       - name: Run tests
         run: pytest
         env:

diff --git a/environment.yml b/environment.yml
@@ -37,4 +37,3 @@ dependencies:
   - pip:
     - varfish-cli
     - biomedsheets
-