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bihealth · Sep 2, 2021 · 23e2f09 · 23e2f09
1 parent acf76b5
commit 23e2f09
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diff --git a/snappy_pipeline/workflows/somatic_variant_calling/__init__.py b/snappy_pipeline/workflows/somatic_variant_calling/__init__.py
@@ -815,6 +815,7 @@ def _get_log_file(self, action):
 
     def get_args(self, action):
         _ = action
+
         def arg_function(wildcards):
             donor = self.donor_by_name[wildcards.donor_name]
             result = {}

diff --git a/snappy_pipeline/workflows/somatic_variant_filtration/__init__.py b/snappy_pipeline/workflows/somatic_variant_filtration/__init__.py
@@ -174,6 +174,7 @@ def get_normal_lib_name(self, wildcards):
     def get_params(self, action):
         """Return arguments to pass down."""
         _ = action
+
         def params_function(wildcards):
             if wildcards.tumor_library not in self.donors:
                 return {

diff --git a/snappy_pipeline/workflows/somatic_variant_signatures/__init__.py b/snappy_pipeline/workflows/somatic_variant_signatures/__init__.py
@@ -90,6 +90,7 @@ def get_log_file(self, action):
     def get_params(self, action):
         """Return arguments to pass down."""
         _ = action
+
         def params_function(wildcards):
             if wildcards.tumor_library not in self.donors:
                 return {