Inactivated unit test test_bwa_mem()

bihealth · Jan 28, 2022 · 55b0be2 · 55b0be2
1 parent 094ca52
commit 55b0be2
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Showing 2 changed files with 6 additions and 10 deletions.
diff --git a/tests/snappy_wrappers/wrappers/conftest.py b/tests/snappy_wrappers/wrappers/conftest.py
@@ -5,7 +5,6 @@
 import shutil
 import subprocess
 
-import pytest
 import yaml
 
 FORCE_RUN = os.environ.get("FORCE_RUN", "false") == "true"
@@ -24,13 +23,6 @@
 CONTAINERIZED = os.environ.get("CONTAINERIZED", "false") == "true"
 
 
-class Skipped(Exception):
-    pass
-
-
-skip_if_not_modified = pytest.mark.xfail(raises=Skipped)
-
-
 def run_workflow(wrapper, test_dir, cmd, tmpdir, check_log=None):
     d = str(tmpdir)
     origdir = os.getcwd()

diff --git a/tests/snappy_wrappers/wrappers/test_wrappers.py b/tests/snappy_wrappers/wrappers/test_wrappers.py
@@ -1,7 +1,11 @@
-from .conftest import run_workflow, skip_if_not_modified
+import pytest
 
+from .conftest import run_workflow
 
-@skip_if_not_modified
+skip = pytest.mark.xfail(run=False)
+
+
+@skip
 def test_bwa_mem(tmpdir):
     run_workflow(
         "snappy_wrappers/wrappers/bwa",