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Allowing joint queries of larger cohorts (#241) #352

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merged 1 commit into from Mar 4, 2022
Merged

Allowing joint queries of larger cohorts (#241) #352

merged 1 commit into from Mar 4, 2022

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holtgrewe
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@holtgrewe holtgrewe added this to the athenea-1.1.0 (RC) milestone Feb 11, 2022
@holtgrewe holtgrewe force-pushed the 241-split-union-queries branch 2 times, most recently from 5d21b6b to 42d1391 Compare February 11, 2022 09:05
@holtgrewe holtgrewe force-pushed the 241-split-union-queries branch 2 times, most recently from cc1e561 to 41a33cb Compare March 4, 2022 15:21
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This is only resolving half of #241 but deploying this will allow us to move forward with the remaining issues.

@holtgrewe holtgrewe merged commit 005f7d4 into main Mar 4, 2022
@holtgrewe holtgrewe deleted the 241-split-union-queries branch March 4, 2022 15:44
snesic added a commit to snesic/varfish-server that referenced this pull request Mar 9, 2022
@snesic
Add extra annotations scores to the filtered variants (varfish-org#242).
838611d 
Squashed commit of the following:

commit 5a0ff15
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Wed Mar 9 11:14:51 2022 +0100

    Documenting release cycle and branch names

commit 7c50327
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Wed Mar 9 11:13:04 2022 +0100

    Capping max. number of cases to query at once (varfish-org#372) (varfish-org#377)

commit cc29127
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Wed Mar 9 08:41:46 2022 +0100

    Fixing problem with sodar-core upgrade (varfish-org#375) (varfish-org#376)

commit 034c311
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Mon Mar 7 15:52:05 2022 +0100

    Optimize retrieving query IDs via API (varfish-org#371) (varfish-org#373)

commit bdb49c8
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Mon Mar 7 15:40:35 2022 +0100

    Fix to support sodar-core v0.10.10.

commit be2ed28
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Mon Mar 7 14:41:25 2022 +0100

    Improving performance for fetching result queries (varfish-org#371) (varfish-org#372)

    Closes: varfish-org#371

commit c0fbd74
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Mon Mar 7 11:40:52 2022 +0100

    Fixing minor bug in _ClosingWrapper.

commit 00ab43f
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Fri Mar 4 17:24:31 2022 +0100

    Documenting Clinical Beacon v1 protocol.

commit b954c1e
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Fri Mar 4 16:48:19 2022 +0100

    Changing branch for badge to main

commit 005f7d4
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Fri Mar 4 16:44:36 2022 +0100

    Splitting UNION queries in joint mode (varfish-org#241) (varfish-org#352)

commit 5e04b4d
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Fri Mar 4 16:42:18 2022 +0100

    Fixing beaconsite queries with dots in the key id (varfish-org#369) (varfish-org#370)

    Closes: varfish-org#369

commit dc32e7e
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Fri Mar 4 16:16:01 2022 +0100

    Adding REST API for small variants (varfish-org#332) (varfish-org#341)

commit bb8a9c1
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Fri Mar 4 14:46:31 2022 +0100

    Fixing problem with ACMD classification (varfish-org#359) (varfish-org#368)

    Closes: varfish-org#359

commit fbfc86c
Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Date:   Fri Mar 4 14:02:42 2022 +0100

    Bump url-parse from 1.5.4 to 1.5.10 in /varfish/vueapp (varfish-org#365)

    Bumps [url-parse](https://github.com/unshiftio/url-parse) from 1.5.4 to 1.5.10.
    - [Release notes](https://github.com/unshiftio/url-parse/releases)
    - [Commits](unshiftio/url-parse@1.5.4...1.5.10)

    ---
    updated-dependencies:
    - dependency-name: url-parse
      dependency-type: indirect
    ...

    Signed-off-by: dependabot[bot] <support@github.com>

    Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

commit b06b258
Author: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Date:   Fri Mar 4 14:02:36 2022 +0100

    Bump follow-redirects from 1.14.7 to 1.14.8 in /varfish/vueapp (varfish-org#356)

    Bumps [follow-redirects](https://github.com/follow-redirects/follow-redirects) from 1.14.7 to 1.14.8.
    - [Release notes](https://github.com/follow-redirects/follow-redirects/releases)
    - [Commits](follow-redirects/follow-redirects@v1.14.7...v1.14.8)

    ---
    updated-dependencies:
    - dependency-name: follow-redirects
      dependency-type: indirect
    ...

    Signed-off-by: dependabot[bot] <support@github.com>

    Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

commit b017ad2
Author: Svetozar N <snesic@gmail.com>
Date:   Fri Mar 4 14:01:57 2022 +0100

    Updates to developer_installation.rst (varfish-org#340)

commit 00bfc89
Author: Manuel Holtgrewe <manuel.holtgrewe@bihealth.de>
Date:   Fri Feb 25 10:23:55 2022 +0100

    Removing `display_hgmd_public_membership` (varfish-org#363)

commit 2898ef0
Author: Oliver Stolpe <oliver.stolpe@bih-charite.de>
Date:   Wed Feb 23 11:30:11 2022 +0100

    Extending developers documentation with topics git and running specific tests (varfish-org#362)

commit 21a6e75
Author: Oliver Stolpe <oliver.stolpe@bih-charite.de>
Date:   Tue Feb 22 17:32:47 2022 +0100

    Fixing broken case detail page that has comments on svs. (varfish-org#360)
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