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@bimberlabinternal

Bimber Lab Internal Projects

This holds internal projects from the Bimber Lab. For public projects, see: https://github.com/bimberlab

Pinned

  1. CellMembrane CellMembrane Public

    An R package with wrappers and pipelines for single cell RNA-seq analysis

    R 8 3

  2. Rdiscvr Rdiscvr Public

    This in an R package that provides helper functions to query data in LabKey/DISCVR modules.

    R 1

Repositories

Showing 10 of 19 repositories
  • CellMembrane Public

    An R package with wrappers and pipelines for single cell RNA-seq analysis

    R 8 3 3 5 Updated May 24, 2024
  • RIRA Public

    Code for utility of RIRA for classification of cell types/phenotypes

    R 4 2 0 0 Updated May 24, 2024
  • BimberLabKeyModules Public

    This holds LabKey Server modules used by the Bimber Lab that are private or unlikely to be of general interest

    CSS 0 3 1 0 Updated May 24, 2024
  • docker-base Public

    Designed to build a base docker image for R packages

    Dockerfile 0 Apache-2.0 0 0 0 Updated May 23, 2024
  • DevOps Public

    Tools to manage software and repositories for the Bimber Lab

    Shell 0 Apache-2.0 0 0 0 Updated May 8, 2024
  • LabDevKitModules Public

    Contains the LDK LabKey module, which has lower-level code and is a dependency of several other modules

    JavaScript 0 2 0 1 Updated May 1, 2024
  • Rdiscvr Public

    This in an R package that provides helper functions to query data in LabKey/DISCVR modules.

    R 0 Apache-2.0 1 0 0 Updated Apr 18, 2024
  • VariantAnnotation Public

    A set of scripts to build custom funcotator-compatible data sources

    Shell 0 Apache-2.0 0 0 0 Updated Dec 14, 2023
  • DockerBase Public

    This will manage and build base docker images designed to be used by other lab repos

    0 Apache-2.0 0 0 0 Updated Nov 13, 2023
  • mcc-website Public

    This project holds the content for the MCC public website

    HTML 0 0 0 0 Updated Apr 11, 2023
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