MicroN-diverticulitis

Analysis of stool metagenomes and untargeted metabolomics in 121 participants with a diagnosis of diverticulitis and 121 matched diverticulitis-free controls from the MicroN study within the large Nurses' Health Study II cohort

Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
0a.mgx_data_prepare_micron.R		0a.mgx_data_prepare_micron.R
0b.mbx_data_prepare_micron.R		0b.mbx_data_prepare_micron.R
1a.alpha-diversity.R		1a.alpha-diversity.R
1b.pcoa.R		1b.pcoa.R
1c.permanova.R		1c.permanova.R
1d.permanova_combine.R		1d.permanova_combine.R
1e.vis_barplot_genus.R		1e.vis_barplot_genus.R
2a.maaslin.R		2a.maaslin.R
2b.maaslin_severe.R		2b.maaslin_severe.R
2c.mgx_boxplot.R		2c.mgx_boxplot.R
2d.mbx_individual.R		2d.mbx_individual.R
2e.similarity_ibd.R		2e.similarity_ibd.R
2f.mgx_stratified.R		2f.mgx_stratified.R
3.interaction_pattern.R		3.interaction_pattern.R
4a.mbx_class.R		4a.mbx_class.R
4c.mbx_data_basic.R		4c.mbx_data_basic.R
5a.halla_data_prepare_raw.R		5a.halla_data_prepare_raw.R
5b.mgx_mbx_correlation.R		5b.mgx_mbx_correlation.R
5c.corr_difference_plot_raw_final.R		5c.corr_difference_plot_raw_final.R
5d.mgx_mbx_scatter.R		5d.mgx_mbx_scatter.R
5e.halla_data_prepare_raw_cer_species.R		5e.halla_data_prepare_raw_cer_species.R
5f.halla_data_prepare_raw_cer_ec.R		5f.halla_data_prepare_raw_cer_ec.R
6a.rf_microbiome.py		6a.rf_microbiome.py
6b.rf_all.py		6b.rf_all.py
README.md		README.md

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