-
Notifications
You must be signed in to change notification settings - Fork 13
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
creating a DATS document for the AGR BDbag generated by Carl Kesselma…
…n under KC7
- Loading branch information
1 parent
219bc68
commit 6ba98dd
Showing
2 changed files
with
253 additions
and
1 deletion.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,253 @@ | ||
{ | ||
"identifiers": [{ | ||
"identifier": "http://identifiers.org/minid:b9j69h", | ||
"identifierSource": "minid" | ||
}], | ||
"title": "AGR Data set with identifier-based references to data in cloud storage", | ||
"description": "AGR Data set with identifier-based references to data in cloud storage", | ||
"dates": [{ | ||
"date": "2018-03-19 17:43:57.073822", | ||
"type": { | ||
"value": "creation", | ||
"valueIRI": "" | ||
} | ||
}], | ||
"creators": [{ | ||
"identifiers": [{ | ||
"identifier": "http://orcid.org/0000-0003-2280-917X", | ||
"identifierSource": "orcid" | ||
}], | ||
"affiliations": [{"name": "University of Southern California / Information Science"}], | ||
"firstName": "Michel", | ||
"fullName": "Mike d'Arcy", | ||
"lastName": "d'Arcy" | ||
}], | ||
"types": [{"information": {"value": "model organism data"}}], | ||
"hasPart": [ | ||
{ | ||
"identifiers": [{ | ||
"identifier": "minid:b9n39d", | ||
"identifierSource": "minid" | ||
}], | ||
"title": "A list of disease ontology terms obtained from the Disease Ontology website.", | ||
"types": [{"information": {"value": "ontology terms"}}], | ||
"distributions": [{ | ||
"identifier": { | ||
"identifier": "minid:b9n39d", | ||
"identifierSource": "" | ||
}, | ||
"access": {"accessURL": "/data/DO/do_1.0.obo"}, | ||
"conformsTo": [{ | ||
"name": "obo format", | ||
"type": { | ||
"value": "text/plain", | ||
"valueIRI": "" | ||
} | ||
}], | ||
"size": 4784295, | ||
"unit": { | ||
"value": "byte", | ||
"valueIRI": "http://purl.obolibrary.org/obo/UO_0000233" | ||
}, | ||
"version": "Release 2.6.2018" | ||
}] | ||
}, | ||
{ | ||
"identifiers": [{ | ||
"identifier": "minid:b9hd64", | ||
"identifierSource": "minid" | ||
}], | ||
"title": "A list of gene ontology terms obtained from the Gene Ontology Consortium.", | ||
"types": [{"information": {"value": "ontology terms"}}], | ||
"distributions": [{ | ||
"identifier": { | ||
"identifier": "minid:b9hd64", | ||
"identifierSource": "" | ||
}, | ||
"access": {"accessURL": "data/GO/go_1.0.obo"}, | ||
"conformsTo": [{ | ||
"name": "obo format", | ||
"type": { | ||
"value": "text/plain", | ||
"valueIRI": "" | ||
} | ||
}], | ||
"size": 36520029, | ||
"unit": { | ||
"value": "byte", | ||
"valueIRI": "http://purl.obolibrary.org/obo/UO_0000233" | ||
}, | ||
"version": "Release 2.6.2018" | ||
}] | ||
}, | ||
{ | ||
"identifiers": [{ | ||
"identifier": "minid:b9px1z", | ||
"identifierSource": "minid" | ||
}], | ||
"title": "A list of sequence ontology terms obtained from the Sequence Ontology website.", | ||
"types": [{"information": {"value": "ontology terms"}}], | ||
"dates": [{ | ||
"date": "2.6.2018", | ||
"type": { | ||
"value": "creation", | ||
"valueIRI": "" | ||
} | ||
}], | ||
"distributions": [{ | ||
"identifier": { | ||
"identifier": "minid:b9px1z", | ||
"identifierSource": "" | ||
}, | ||
"access": {"accessURL": "data/SO/so_1.0.obo"}, | ||
"conformsTo": [{ | ||
"name": "obo format", | ||
"type": { | ||
"value": "text/plain", | ||
"valueIRI": "" | ||
} | ||
}], | ||
"size": 902733, | ||
"unit": { | ||
"value": "byte", | ||
"valueIRI": "http://purl.obolibrary.org/obo/UO_0000233" | ||
}, | ||
"version": "Release 11.24.2015" | ||
}] | ||
}, | ||
{ | ||
"identifiers": [{ | ||
"identifier": "minid:b9dm68", | ||
"identifierSource": "minid" | ||
}], | ||
"title": "Flybase MOD data", | ||
"types": [{"information": {"value": "MOD data"}}], | ||
"distributions": [{ | ||
"identifier": { | ||
"identifier": "minid:b9dm68", | ||
"identifierSource": "" | ||
}, | ||
"access": {"accessURL": "data/FB_1.0.4_4.tar.gz"}, | ||
"conformsTo": [{ | ||
"name": "tar.gz", | ||
"type": { | ||
"value": "application/x-compressed", | ||
"valueIRI": "" | ||
} | ||
}], | ||
"size": 7361930, | ||
"unit": { | ||
"value": "byte", | ||
"valueIRI": "http://purl.obolibrary.org/obo/UO_0000233" | ||
}, | ||
"version": "1.0.4_4" | ||
}] | ||
}, | ||
{ | ||
"identifiers": [{ | ||
"identifier": "minid:b9cm3t", | ||
"identifierSource": "minid" | ||
}], | ||
"title": "A list of gene ontology associations for Drosophila obtained from the Gene Ontology Consortium.", | ||
"types": [{"information": {"value": "gene association data"}}], | ||
"distributions": [{ | ||
"identifier": { | ||
"identifier": "minid:b9cm3t", | ||
"identifierSource": "" | ||
}, | ||
"access": {"accessURL": "data/GO/ANNOT/gene_association.fb.gz"}, | ||
"conformsTo": [{ | ||
"name": "tar.gz", | ||
"type": { | ||
"value": "application/x-compressed", | ||
"valueIRI": "" | ||
} | ||
}], | ||
"size": 2731033, | ||
"unit": { | ||
"value": "byte", | ||
"valueIRI": "http://purl.obolibrary.org/obo/UO_0000233" | ||
}, | ||
"version": "Last updated 2.6.2018" | ||
}] | ||
}, | ||
{ | ||
"identifiers": [{ | ||
"identifier": "http://identifiers.org/minid:b9m393", | ||
"identifierSource": "minid" | ||
}], | ||
"title": "JSON files containing orthology derived from DIOPT v6.2 http://www.flyrnai.org/cgi-bin/DRSC_orthologs.pl", | ||
"types": [{"information": {"value": "orthology data"}}], | ||
"distributions": [{ | ||
"identifier": { | ||
"identifier": "http://identifiers.org/minid:b9m393", | ||
"identifierSource": "minid" | ||
}, | ||
"access": {"accessURL": "data/ORTHO/orthology_FlyBase_1.0.0_2.json.tar.gz"}, | ||
"conformsTo": [ | ||
{ | ||
"name": "tar.gz", | ||
"type": { | ||
"value": "application/x-compressed", | ||
"valueIRI": "" | ||
} | ||
}, | ||
{ | ||
"name": "json", | ||
"type": { | ||
"value": "application/json", | ||
"valueIRI": "" | ||
} | ||
} | ||
], | ||
"size": 2614596, | ||
"unit": { | ||
"value": "byte", | ||
"valueIRI": "http://purl.obolibrary.org/obo/UO_0000233" | ||
}, | ||
"version": "DIOPT v6.2" | ||
}] | ||
} | ||
], | ||
"distributions": [{ | ||
"identifier": { | ||
"identifier": "http://identifiers.org/minid:b9j69h", | ||
"identifierSource": "minid" | ||
}, | ||
"access": { | ||
"landingPage": "http://minid.bd2k.org/minid/landingpage/ark:/57799/b9j69h", | ||
"accessURL": "https://nih-commons.s3.amazonaws.com/misc/agr-example.tgz" | ||
}, | ||
"conformsTo": [{ | ||
"name": "tar.gz", | ||
"type": { | ||
"value": "application/x-compressed", | ||
"valueIRI": "" | ||
} | ||
}], | ||
"size": -1, | ||
"unit": { | ||
"value": "byte", | ||
"valueIRI": "http://purl.obolibrary.org/obo/UO_0000233" | ||
}, | ||
"version": "" | ||
}], | ||
"extraProperties": [ | ||
{ | ||
"category": "checksum", | ||
"categoryIRI": "http://purl.obolibrary.org/obo/NCIT_C43522", | ||
"values": [{ | ||
"value": "6484968f81afac84857d02b573b0d589fb2f9582a2b920572830dc5781e0a53c", | ||
"valueIRI": "" | ||
}] | ||
}, | ||
{ | ||
"category": "checksum algorithm", | ||
"categoryIRI": "http://purl.obolibrary.org/obo/NCIT_C16275", | ||
"values": [{ | ||
"value": "MD5", | ||
"valueIRI": "" | ||
}] | ||
} | ||
] | ||
} |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
|
@@ -625,7 +625,6 @@ | |
"value": "dualIndividual" | ||
} | ||
], | ||
"landingPage": "", | ||
"types": [ | ||
{ | ||
"valueIRI": "", | ||
|