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{% set version = "0.3.1.0" %}
{% set sha256 = "af85fa131530a30becc6e31bf248fd02c2ded05ec2445c30768553e60f846552" %}
package:
name: prophyle
version: {{ version }}
source:
url: https://pypi.io/packages/source/p/prophyle/prophyle-{{version }}.tar.gz
sha256: {{ sha256 }}
build:
number: 4
skip: True # [py27]
script:
entry_points:
- prophyle = prophyle.prophyle:main
- prophyle_analyze.py = prophyle.prophyle_analyze:main
- prophyle_assignment.py = prophyle.prophyle_assignment:main
- prophyle_ncbi_tree.py = prophyle.prophyle_ncbi_tree:main
- prophyle_otu_table.py = prophyle.prophyle_otu_table:main
- prophyle_paired_end.py = prophyle.prophyle_paired_end:main
- prophyle_plot_tree.py = prophyle.prophyle_plot_tree:main
- prophyle_propagation_makefile.py = prophyle.prophyle_propagation_makefile:main
- prophyle_propagation_postprocessing.py = prophyle.prophyle_propagation_postprocessing:main
- prophyle_propagation_preprocessing.py = prophyle.prophyle_propagation_preprocessing:main
- prophyle_split_allseq.py = prophyle.prophyle_split_allseq:main
requirements:
build:
- {{ compiler('cxx') }}
- {{ compiler('c') }}
host:
- python
- samtools
- ete3
- bitarray
- scipy
- wheel
- zlib
- psutil
- pysam
- zlib
run:
- python
- samtools
- ete3
- bitarray
- scipy
- wheel
- zlib
- psutil
- pysam
- zlib
test:
imports:
- prophyle
commands:
- prophyle --help
- prophyle download --help
- prophyle index --help
- prophyle classify --help
- prophyle analyze --help
- prophyle compress --help
- prophyle decompress --help
- prophyle compile --help
- prophyle_analyze.py --help
- prophyle_assignment.py --help
- prophyle_ncbi_tree.py --help
- prophyle_otu_table.py --help
- prophyle_paired_end.py --help
- prophyle_plot_tree.py --help
- prophyle_propagation_makefile.py --help
- prophyle_propagation_postprocessing.py --help || true # todo: once fixed, remove '|| true'
- prophyle_propagation_preprocessing.py --help
- prophyle_split_allseq.py --help
about:
home: https://github.com/karel-brinda/prophyle
license: MIT
summary: ProPhyle is an accurate, resource-frugal and deterministic phylogeny-based metagenomic classifier.
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