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new packages: r-umi4c, r-shaman (#13396)
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* new package: r-umi4c, r-shaman
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matthdsm committed Jan 30, 2019
1 parent 2889b69 commit 75757c8
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1 change: 1 addition & 0 deletions recipes/r-shaman/build.sh
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$R CMD INSTALL --build .
40 changes: 40 additions & 0 deletions recipes/r-shaman/meta.yaml
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{% set version = "2.0" %}
{% set git_hash = "52d5edefc170" %}
package:
name: 'r-shaman'
version: '{{ version }}'

source:
url: 'https://bitbucket.org/tanaylab/shaman/get/{{ git_hash }}.zip'
sha256: 525880e920a1e90a84f4cfcf3743019f3e5e70eb6287acb3a93bb7ee38dcc091

build:
number: 0
skip: true #[osx]
rpaths:
- lib/R/lib/
- lib/

requirements:
host:
- r-base
- r-devtools
- r-rann
- r-domc
- r-misha
- bioconductor-genomeinfodb
- bioconductor-gviz
run:
- r-base
- r-rann
- r-domc
- r-misha
- bioconductor-genomeinfodb
- bioconductor-gviz
test:
commands:
- '$R -e "library(shaman)"'
about:
home: 'https://tanaylab.bitbucket.io/shaman/index.html'
license: GPL
summary: 'The shaman package - sampling HiC contact matrices for a-parametric normalization'
1 change: 1 addition & 0 deletions recipes/r-umi4c/build.sh
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$R CMD INSTALL --build .
35 changes: 35 additions & 0 deletions recipes/r-umi4c/meta.yaml
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{% set version = "0.0.0.9000" %}
package:
name: 'r-umi4c'
version: '{{ version }}'

source:
url: 'https://bitbucket.org/tanaylab/umi4cpackage/get/59c73399f73d.zip'
sha256: e039134249e348843e191a46e2c2421003b3709156f0c9119a75a8450eecb40f

build:
number: 0
skip: true #[osx]
rpaths:
- lib/R/lib/
- lib/

requirements:
host:
- r-base
- r-devtools
- r-zoo
- r-misha

run:
- r-base
- r-zoo
- r-misha

test:
commands:
- '$R -e "library(umi4cPackage)"'
about:
home: 'https://bitbucket.org/tanaylab/umi4cpackage'
license: GPL
summary: 'Process UMI-4C data from scratch to produce nice plots.'

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