Update: fgbio with duplex fixes (#5059)

fulcrumgenomics/fgbio#257
bioconda · Jun 27, 2017 · f2a8336 · f2a8336
1 parent a9cc34f
commit f2a8336
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Showing 2 changed files with 11 additions and 11 deletions.
diff --git a/recipes/fgbio/build.sh b/recipes/fgbio/build.sh
@@ -8,12 +8,12 @@ mkdir -p $PREFIX/bin
 cd $SRC_DIR
 
 # Development version build
-#sbt update
-#sbt assembly
-#cp target/scala-*/fgbio-*.jar $outdir/fgbio.jar
+sbt update
+sbt assembly
+cp target/scala-*/fgbio-*.jar $outdir/fgbio.jar
 
 # Release jar
-cp fgbio*.jar $outdir/fgbio.jar
+#cp fgbio*.jar $outdir/fgbio.jar
 
 cp $RECIPE_DIR/fgbio.py $outdir/fgbio
 chmod +x $outdir/fgbio

diff --git a/recipes/fgbio/meta.yaml b/recipes/fgbio/meta.yaml
@@ -1,5 +1,5 @@
-{% set version="0.2.0" %}
-#{% set tag="bcf4e16" %}
+{% set version="0.2.1a" %}
+{% set tag="4cddb22" %}
 about:
     home: https://github.com/fulcrumgenomics/fgbio
     license: MIT
@@ -11,11 +11,11 @@ build:
   number: 0
   skip: true # [not py27]
 source:
-  #fn: fgbio-{{ tag }}.tar.gz
-  #url: https://github.com/fulcrumgenomics/fgbio/archive/{{ tag }}.tar.gz
-  fn: fgbio-{{ version }}.jar
-  url: https://github.com/fulcrumgenomics/fgbio/releases/download/{{ version }}/fgbio-{{ version }}.jar
-  md5: ef2568c70f0e618e036f911e7ade79e7
+  fn: fgbio-{{ tag }}.tar.gz
+  url: https://github.com/fulcrumgenomics/fgbio/archive/{{ tag }}.tar.gz
+  #fn: fgbio-{{ version }}.jar
+  #url: https://github.com/fulcrumgenomics/fgbio/releases/download/{{ version }}/fgbio-{{ version }}.jar
+  md5: 34b5ef1cdd6dccf1326af2c12e57e9a8
 requirements:
   build:
     - openjdk >=8