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Update: PureCN (1.13.1) with additional segmentation options #11740

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Nov 1, 2018
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Update: PureCN (1.13.1) with additional segmentation options #11740

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10 changes: 6 additions & 4 deletions recipes/bioconductor-purecn/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,14 +1,14 @@
{% set version = "1.11.20" %}
{% set version = "1.13.1" %}
{% set name = "PureCN" %}
{% set bioc = "3.7" %}
{% set bioc = "3.8" %}

package:
name: 'bioconductor-{{ name|lower }}'
version: '{{ version }}'
source:
url: https://github.com/lima1/PureCN/archive/cdd2df3.tar.gz
url: https://github.com/lima1/PureCN/archive/de563d2.tar.gz
#url: https://depot.galaxyproject.org/software/bioconductor-purecn/bioconductor-purecn_{{ version }}_src_all.tar.gz
sha256: 711861830f36d74f3db8d43aad7dd6e9c3aaaceaec28677cf29ad72643730863
sha256: fd38af3a8b7e62e3280d5178040ece0ad4deb5e385ea9ff3126b088b95770308
build:
number: 2
rpaths:
Expand All @@ -18,6 +18,7 @@ requirements:
host:
- 'bioconductor-biocgenerics >=0.26.0,<0.28.0'
- 'bioconductor-biostrings >=2.48.0,<2.50.0'
- 'bioconductor-copynumber>=1.20.0,<1.22.0'
- 'bioconductor-dnacopy >=1.54.0,<1.56.0'
- 'bioconductor-genomeinfodb >=1.16.0,<1.18.0'
- 'bioconductor-genomicfeatures >=1.32.2,<1.34.0'
Expand All @@ -43,6 +44,7 @@ requirements:
run:
- 'bioconductor-biocgenerics >=0.26.0,<0.28.0'
- 'bioconductor-biostrings >=2.48.0,<2.50.0'
- 'bioconductor-copynumber>=1.20.0,<1.22.0'
- 'bioconductor-dnacopy >=1.54.0,<1.56.0'
- 'bioconductor-genomeinfodb >=1.16.0,<1.18.0'
- 'bioconductor-genomicfeatures >=1.32.2,<1.34.0'
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