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Fix rendering of more packages #15245

Merged
merged 8 commits into from
May 12, 2019
Merged

Fix rendering of more packages #15245

merged 8 commits into from
May 12, 2019

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dpryan79
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@dpryan79 dpryan79 commented May 10, 2019 •
edited

ℹ️
If this is your first pull request to Bioconda please ping @bioconda/core so it can be reviewed and to request being added as a member of the Bioconda team. Members of the Bioconda team are able to merge their own pull requests once tests and linting have passed.

  • I have read the guidelines for bioconda recipes.
  • This PR adds a new recipe.
  • AFAIK, this recipe is directly relevant to the biological sciences (otherwise, please submit to the more general purpose conda-forge channel).
  • This PR updates an existing recipe.
  • This PR does something else (explain below).

@dpryan79
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dpryan79 commented May 10, 2019 •
edited

Xref #15196

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biocondabot bot commented May 10, 2019 •
edited

Package(s) built on CircleCI are ready for inspection:

Arch Package Repodata
linux-64 gromacs-2018.6-h6bb024c_1.tar.bz2 repodata.json
linux-64 gromacs-2019.1-h6bb024c_2.tar.bz2 repodata.json
linux-64 kat-2.0.8-h886bf27_4.tar.bz2 repodata.json
linux-64 last-490-hf484d3e_4.tar.bz2 repodata.json
linux-64 last-874-hdbcaa40_2.tar.bz2 repodata.json
linux-64 last-963-hdbcaa40_1.tar.bz2 repodata.json
linux-64 samtools-0.1.19-h94a8ba4_6.tar.bz2 repodata.json
linux-64 samtools-1.1-h94a8ba4_3.tar.bz2 repodata.json
osx-64 gromacs-2018.6-h04f5b5a_1.tar.bz2 repodata.json
osx-64 gromacs-2019.1-h04f5b5a_2.tar.bz2 repodata.json
osx-64 last-490-h0a44026_4.tar.bz2 repodata.json
osx-64 last-874-hd9629dc_2.tar.bz2 repodata.json
osx-64 last-963-hd9629dc_1.tar.bz2 repodata.json
osx-64 samtools-0.1.19-ha6d3ead_6.tar.bz2 repodata.json
osx-64 samtools-1.1-ha6d3ead_3.tar.bz2 repodata.json

You may alsu use conda to install these:

  • For packages in linux-64: 
    conda install -c https://56763-42372094-gh.circle-artifacts.com/0/tmp/artifacts/packages <package name>
  • For packages in osx-64: 
    conda install -c https://56768-42372094-gh.circle-artifacts.com/0/tmp/artifacts/packages <package name>

Docker image(s) built:

Package Tag Install with docker
gromacs 2018.6--h6bb024c_1
showcurl "https://56763-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/gromacs%3A2018.6--h6bb024c_1.tar.gz" | gzip -dc | docker load
gromacs 2019.1--h6bb024c_2
showcurl "https://56763-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/gromacs%3A2019.1--h6bb024c_2.tar.gz" | gzip -dc | docker load
kat 2.0.8--h886bf27_4
showcurl "https://56763-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/kat%3A2.0.8--h886bf27_4.tar.gz" | gzip -dc | docker load
last 490--hf484d3e_4
showcurl "https://56763-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/last%3A490--hf484d3e_4.tar.gz" | gzip -dc | docker load
last 874--hdbcaa40_2
showcurl "https://56763-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/last%3A874--hdbcaa40_2.tar.gz" | gzip -dc | docker load
last 963--hdbcaa40_1
showcurl "https://56763-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/last%3A963--hdbcaa40_1.tar.gz" | gzip -dc | docker load
samtools 0.1.19--h94a8ba4_6
showcurl "https://56763-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/samtools%3A0.1.19--h94a8ba4_6.tar.gz" | gzip -dc | docker load
samtools 1.1--h94a8ba4_3
showcurl "https://56763-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/samtools%3A1.1--h94a8ba4_3.tar.gz" | gzip -dc | docker load

@dpryan79 dpryan79 merged commit 38ac254 into master May 12, 2019
@dpryan79 dpryan79 deleted the fix15196_2 branch May 12, 2019 19:23
kpalin pushed a commit to kpalin/bioconda-recipes that referenced this pull request Aug 7, 2019
@dpryan79 @kpalin
Fix rendering of more packages (bioconda#15245)
ce04b40 
* Fix rendering of more packages

* update recipes

* A few updates

* last probably fails still

* merge master

* fix last/874

* last probably doesn't need python for building
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