_test_format_strings.py

# ----------------------------------------------------------------------------
# Copyright (c) 2013--, emperor development team.
#
# Distributed under the terms of the Modified BSD License.
#
# The full license is in the file LICENSE.md, distributed with this software.
# ----------------------------------------------------------------------------
# flake8: noqa
"""
These are intended to be HTML formatted strings that are used throughout the
codebase and not included in for example format.py, because the length would
violate PEP-8 rules.
"""

PCOA_JS = """
var g_spherePositions = new Array();
g_spherePositions['PC.355'] = { 'name': 'PC.355', 'color': 0, 'x': -0.109166, 'y': 0.087777, 'z': 0.011587, 'P1': -0.109166, 'P2': 0.087777, 'P3': 0.011587, 'P4': -0.062686, 'P5': 0.023153, 'P6': 0.087693, 'P7': 0.001374, 'P8': -0.000014 };
g_spherePositions['PC.607'] = { 'name': 'PC.607', 'color': 0, 'x': 0.068896, 'y': -0.166234, 'z': -0.099830, 'P1': 0.068896, 'P2': -0.166234, 'P3': -0.099830, 'P4': -0.029052, 'P5': 0.050557, 'P6': -0.002952, 'P7': -0.032586, 'P8': -0.021722 };
g_spherePositions['PC.634'] = { 'name': 'PC.634', 'color': 0, 'x': 0.204685, 'y': 0.128911, 'z': -0.029361, 'P1': 0.204685, 'P2': 0.128911, 'P3': -0.029361, 'P4': 0.107658, 'P5': 0.017848, 'P6': 0.007978, 'P7': -0.029200, 'P8': -0.001235 };
g_spherePositions['PC.635'] = { 'name': 'PC.635', 'color': 0, 'x': 0.126132, 'y': -0.002660, 'z': -0.141717, 'P1': 0.126132, 'P2': -0.002660, 'P3': -0.141717, 'P4': -0.009711, 'P5': -0.069427, 'P6': 0.003672, 'P7': 0.042987, 'P8': 0.006443 };
g_spherePositions['PC.593'] = { 'name': 'PC.593', 'color': 0, 'x': 0.096847, 'y': -0.159388, 'z': 0.135272, 'P1': 0.096847, 'P2': -0.159388, 'P3': 0.135272, 'P4': 0.051202, 'P5': -0.020255, 'P6': 0.030703, 'P7': 0.015516, 'P8': 0.014243 };
g_spherePositions['PC.636'] = { 'name': 'PC.636', 'color': 0, 'x': 0.281535, 'y': 0.071066, 'z': 0.097154, 'P1': 0.281535, 'P2': 0.071066, 'P3': 0.097154, 'P4': -0.080647, 'P5': 0.007042, 'P6': -0.045313, 'P7': 0.006558, 'P8': -0.012641 };
g_spherePositions['PC.481'] = { 'name': 'PC.481', 'color': 0, 'x': -0.192383, 'y': 0.014783, 'z': -0.014787, 'P1': -0.192383, 'P2': 0.014783, 'P3': -0.014787, 'P4': 0.019089, 'P5': 0.072641, 'P6': -0.037301, 'P7': 0.039430, 'P8': 0.032535 };
g_spherePositions['PC.354'] = { 'name': 'PC.354', 'color': 0, 'x': -0.293353, 'y': 0.018396, 'z': 0.032988, 'P1': -0.293353, 'P2': 0.018396, 'P3': 0.032988, 'P4': 0.031536, 'P5': -0.028694, 'P6': -0.019423, 'P7': 0.008063, 'P8': -0.055809 };
g_spherePositions['PC.356'] = { 'name': 'PC.356', 'color': 0, 'x': -0.183191, 'y': 34912.621000, 'z': 0.008695, 'P1': -0.183191, 'P2': 34912.621000, 'P3': 0.008695, 'P4': -0.027388, 'P5': -0.052865, 'P6': -0.025058, 'P7': -0.052142, 'P8': 0.038200 };

var g_ellipsesDimensions = new Array();
var g_segments = 8, g_rings = 8, g_radius = 0.006899;
var g_xAxisLength = 0.574888;
var g_yAxisLength = 34912.787234;
var g_zAxisLength = 0.276989;
var g_xMaximumValue = 0.281535;
var g_yMaximumValue = 34912.621000;
var g_zMaximumValue = 0.135272;
var g_xMinimumValue = -0.293353;
var g_yMinimumValue = -0.166234;
var g_zMinimumValue = -0.141717;
var g_maximum = 34912.621000;
var g_pc1Label = "PC1 (26.69 %)";
var g_pc2Label = "PC2 (16.26 %)";
var g_pc3Label = "PC3 (13.78 %)";
var g_number_of_custom_axes = 0;
var g_fractionExplained = [0.266887, 0.162564, 0.137754, 0.112172, 0.100248, 0.082284, 0.075597, 0.062495];
var g_fractionExplainedRounded = [26.69, 16.26, 13.78, 11.22, 10.02, 8.23, 7.56, 6.25];
"""

PCOA_JS_CUSTOM_AXES = """
var g_spherePositions = new Array();
g_spherePositions['PC.355'] = { 'name': 'PC.355', 'color': 0, 'x': -0.109166, 'y': 0.087777, 'z': 0.011587, 'P1': -0.109166, 'P2': 0.087777, 'P3': 0.011587, 'P4': -0.062686, 'P5': 0.023153, 'P6': 0.087693, 'P7': 0.001374, 'P8': -0.000014 };
g_spherePositions['PC.607'] = { 'name': 'PC.607', 'color': 0, 'x': 0.068896, 'y': -0.166234, 'z': -0.099830, 'P1': 0.068896, 'P2': -0.166234, 'P3': -0.099830, 'P4': -0.029052, 'P5': 0.050557, 'P6': -0.002952, 'P7': -0.032586, 'P8': -0.021722 };
g_spherePositions['PC.634'] = { 'name': 'PC.634', 'color': 0, 'x': 0.204685, 'y': 0.128911, 'z': -0.029361, 'P1': 0.204685, 'P2': 0.128911, 'P3': -0.029361, 'P4': 0.107658, 'P5': 0.017848, 'P6': 0.007978, 'P7': -0.029200, 'P8': -0.001235 };
g_spherePositions['PC.635'] = { 'name': 'PC.635', 'color': 0, 'x': 0.126132, 'y': -0.002660, 'z': -0.141717, 'P1': 0.126132, 'P2': -0.002660, 'P3': -0.141717, 'P4': -0.009711, 'P5': -0.069427, 'P6': 0.003672, 'P7': 0.042987, 'P8': 0.006443 };
g_spherePositions['PC.593'] = { 'name': 'PC.593', 'color': 0, 'x': 0.096847, 'y': -0.159388, 'z': 0.135272, 'P1': 0.096847, 'P2': -0.159388, 'P3': 0.135272, 'P4': 0.051202, 'P5': -0.020255, 'P6': 0.030703, 'P7': 0.015516, 'P8': 0.014243 };
g_spherePositions['PC.636'] = { 'name': 'PC.636', 'color': 0, 'x': 0.281535, 'y': 0.071066, 'z': 0.097154, 'P1': 0.281535, 'P2': 0.071066, 'P3': 0.097154, 'P4': -0.080647, 'P5': 0.007042, 'P6': -0.045313, 'P7': 0.006558, 'P8': -0.012641 };
g_spherePositions['PC.481'] = { 'name': 'PC.481', 'color': 0, 'x': -0.192383, 'y': 0.014783, 'z': -0.014787, 'P1': -0.192383, 'P2': 0.014783, 'P3': -0.014787, 'P4': 0.019089, 'P5': 0.072641, 'P6': -0.037301, 'P7': 0.039430, 'P8': 0.032535 };
g_spherePositions['PC.354'] = { 'name': 'PC.354', 'color': 0, 'x': -0.293353, 'y': 0.018396, 'z': 0.032988, 'P1': -0.293353, 'P2': 0.018396, 'P3': 0.032988, 'P4': 0.031536, 'P5': -0.028694, 'P6': -0.019423, 'P7': 0.008063, 'P8': -0.055809 };
g_spherePositions['PC.356'] = { 'name': 'PC.356', 'color': 0, 'x': -0.183191, 'y': 34912.621000, 'z': 0.008695, 'P1': -0.183191, 'P2': 34912.621000, 'P3': 0.008695, 'P4': -0.027388, 'P5': -0.052865, 'P6': -0.025058, 'P7': -0.052142, 'P8': 0.038200 };

var g_ellipsesDimensions = new Array();
var g_segments = 8, g_rings = 8, g_radius = 0.006899;
var g_xAxisLength = 0.574888;
var g_yAxisLength = 34912.787234;
var g_zAxisLength = 0.276989;
var g_xMaximumValue = 0.281535;
var g_yMaximumValue = 34912.621000;
var g_zMaximumValue = 0.135272;
var g_xMinimumValue = -0.293353;
var g_yMinimumValue = -0.166234;
var g_zMinimumValue = -0.141717;
var g_maximum = 34912.621000;
var g_pc1Label = "Instant";
var g_pc2Label = "PC1 (26.69 %)";
var g_pc3Label = "PC2 (16.26 %)";
var g_number_of_custom_axes = 1;
var g_fractionExplained = [0.266887, 0.266887, 0.162564, 0.137754, 0.112172, 0.100248, 0.082284, 0.075597, 0.062495];
var g_fractionExplainedRounded = [26.69, 26.69, 16.26, 13.78, 11.22, 10.02, 8.23, 7.56, 6.25];
"""

PCOA_JS_JACKKNIFED = """
var g_spherePositions = new Array();
g_spherePositions[\'PC.355\'] = { \'name\': \'PC.355\', \'color\': 0, \'x\': 0.300000, \'y\': 0.500000, \'z\': 0.100000, \'P1\': 0.300000, \'P2\': 0.500000, \'P3\': 0.100000, \'P4\': 0.300000 };
g_spherePositions[\'PC.607\'] = { \'name\': \'PC.607\', \'color\': 0, \'x\': 1.100000, \'y\': 1.100000, \'z\': 1.000000, \'P1\': 1.100000, \'P2\': 1.100000, \'P3\': 1.000000, \'P4\': 0.800000 };
g_spherePositions[\'PC.634\'] = { \'name\': \'PC.634\', \'color\': 0, \'x\': 0.100000, \'y\': 3.300000, \'z\': 5.500000, \'P1\': 0.100000, \'P2\': 3.300000, \'P3\': 5.500000, \'P4\': 0.100000 };
g_spherePositions[\'PC.635\'] = { \'name\': \'PC.635\', \'color\': 0, \'x\': 1.000000, \'y\': 2.000000, \'z\': 1.000000, \'P1\': 1.000000, \'P2\': 2.000000, \'P3\': 1.000000, \'P4\': 1.000000 };

var g_ellipsesDimensions = new Array();
g_ellipsesDimensions[\'PC.355\'] = { \'name\': \'PC.355\', \'color\': 0, \'width\': 0.400000, \'height\': 0.500000, \'length\': 0.800000 , \'x\': 0.300000, \'y\': 0.500000, \'z\': 0.100000, \'P1\': 0.300000, \'P2\': 0.500000, \'P3\': 0.100000, \'P4\': 0.300000 }
g_ellipsesDimensions[\'PC.607\'] = { \'name\': \'PC.607\', \'color\': 0, \'width\': 0.100000, \'height\': 2.000000, \'length\': 0.000000 , \'x\': 1.100000, \'y\': 1.100000, \'z\': 1.000000, \'P1\': 1.100000, \'P2\': 1.100000, \'P3\': 1.000000, \'P4\': 0.800000 }
g_ellipsesDimensions[\'PC.634\'] = { \'name\': \'PC.634\', \'color\': 0, \'width\': 0.300000, \'height\': 0.600000, \'length\': 4.000000 , \'x\': 0.100000, \'y\': 3.300000, \'z\': 5.500000, \'P1\': 0.100000, \'P2\': 3.300000, \'P3\': 5.500000, \'P4\': 0.100000 }
g_ellipsesDimensions[\'PC.635\'] = { \'name\': \'PC.635\', \'color\': 0, \'width\': 0.010780, \'height\': 1.000000, \'length\': 0.023000 , \'x\': 1.000000, \'y\': 2.000000, \'z\': 1.000000, \'P1\': 1.000000, \'P2\': 2.000000, \'P3\': 1.000000, \'P4\': 1.000000 }
var g_segments = 8, g_rings = 8, g_radius = 0.012000;
var g_xAxisLength = 1.200000;
var g_yAxisLength = 3.800000;
var g_zAxisLength = 5.600000;
var g_xMaximumValue = 1.100000;
var g_yMaximumValue = 3.300000;
var g_zMaximumValue = 5.500000;
var g_xMinimumValue = 0.100000;
var g_yMinimumValue = 0.500000;
var g_zMinimumValue = 0.100000;
var g_maximum = 5.500000;
var g_pc1Label = "PC1 (44.00 %)";
var g_pc2Label = "PC2 (40.00 %)";
var g_pc3Label = "PC3 (15.00 %)";
var g_number_of_custom_axes = 0;
var g_fractionExplained = [0.440000, 0.400000, 0.150000, 0.010000];
var g_fractionExplainedRounded = [44.00, 40.00, 15.00, 1.00];
"""

PCOA_JS_SEGMENTS = """
var g_spherePositions = new Array();
g_spherePositions[\'PC.355\'] = { \'name\': \'PC.355\', \'color\': 0, \'x\': 0.300000, \'y\': 0.500000, \'z\': 0.100000, \'P1\': 0.300000, \'P2\': 0.500000, \'P3\': 0.100000, \'P4\': 0.300000 };
g_spherePositions[\'PC.607\'] = { \'name\': \'PC.607\', \'color\': 0, \'x\': 1.100000, \'y\': 1.100000, \'z\': 1.000000, \'P1\': 1.100000, \'P2\': 1.100000, \'P3\': 1.000000, \'P4\': 0.800000 };
g_spherePositions[\'PC.634\'] = { \'name\': \'PC.634\', \'color\': 0, \'x\': 0.100000, \'y\': 3.300000, \'z\': 5.500000, \'P1\': 0.100000, \'P2\': 3.300000, \'P3\': 5.500000, \'P4\': 0.100000 };
g_spherePositions[\'PC.635\'] = { \'name\': \'PC.635\', \'color\': 0, \'x\': 1.000000, \'y\': 2.000000, \'z\': 1.000000, \'P1\': 1.000000, \'P2\': 2.000000, \'P3\': 1.000000, \'P4\': 1.000000 };

var g_ellipsesDimensions = new Array();
g_ellipsesDimensions[\'PC.355\'] = { \'name\': \'PC.355\', \'color\': 0, \'width\': 0.400000, \'height\': 0.500000, \'length\': 0.800000 , \'x\': 0.300000, \'y\': 0.500000, \'z\': 0.100000, \'P1\': 0.300000, \'P2\': 0.500000, \'P3\': 0.100000, \'P4\': 0.300000 }
g_ellipsesDimensions[\'PC.607\'] = { \'name\': \'PC.607\', \'color\': 0, \'width\': 0.100000, \'height\': 2.000000, \'length\': 0.000000 , \'x\': 1.100000, \'y\': 1.100000, \'z\': 1.000000, \'P1\': 1.100000, \'P2\': 1.100000, \'P3\': 1.000000, \'P4\': 0.800000 }
g_ellipsesDimensions[\'PC.634\'] = { \'name\': \'PC.634\', \'color\': 0, \'width\': 0.300000, \'height\': 0.600000, \'length\': 4.000000 , \'x\': 0.100000, \'y\': 3.300000, \'z\': 5.500000, \'P1\': 0.100000, \'P2\': 3.300000, \'P3\': 5.500000, \'P4\': 0.100000 }
g_ellipsesDimensions[\'PC.635\'] = { \'name\': \'PC.635\', \'color\': 0, \'width\': 0.010780, \'height\': 1.000000, \'length\': 0.023000 , \'x\': 1.000000, \'y\': 2.000000, \'z\': 1.000000, \'P1\': 1.000000, \'P2\': 2.000000, \'P3\': 1.000000, \'P4\': 1.000000 }
var g_segments = 14, g_rings = 14, g_radius = 0.012000;
var g_xAxisLength = 1.200000;
var g_yAxisLength = 3.800000;
var g_zAxisLength = 5.600000;
var g_xMaximumValue = 1.100000;
var g_yMaximumValue = 3.300000;
var g_zMaximumValue = 5.500000;
var g_xMinimumValue = 0.100000;
var g_yMinimumValue = 0.500000;
var g_zMinimumValue = 0.100000;
var g_maximum = 5.500000;
var g_pc1Label = "PC1 (44.00 %)";
var g_pc2Label = "PC2 (40.00 %)";
var g_pc3Label = "PC3 (15.00 %)";
var g_number_of_custom_axes = 0;
var g_fractionExplained = [0.440000, 0.400000, 0.150000, 0.010000];
var g_fractionExplainedRounded = [44.00, 40.00, 15.00, 1.00];
"""

MAPPING_FILE_JS = """var g_mappingFileHeaders = ['BarcodeSequence','LinkerPrimerSequence','Treatment','DOB','Description'];
var g_mappingFileData = { 'PC.636': ['ACGGTGAGTGTC','YATGCTGCCTCCCGTAGGAGT','Fast','20080116','Fasting_mouse_I.D._636'],'PC.355': ['AACTCGTCGATG','YATGCTGCCTCCCGTAGGAGT','Control','20061218','Control_mouse_I.D._355'],'PC.607': ['AACTGTGCGTAC','YATGCTGCCTCCCGTAGGAGT','Fast','20071112','Fasting_mouse_I.D._607'],'PC.634': ['ACAGAGTCGGCT','YATGCTGCCTCCCGTAGGAGT','Fast','20080116','Fasting_mouse_I.D._634'],'PC.635': ['ACCGCAGAGTCA','YATGCTGCCTCCCGTAGGAGT','Fast','20080116','Fasting_mouse_I.D._635'],'PC.593': ['AGCAGCACTTGT','YATGCTGCCTCCCGTAGGAGT','Control','20071210','Control_mouse_I.D._593'],'PC.356': ['ACAGACCACTCA','YATGCTGCCTCCCGTAGGAGT','Control','20061126','Control_mouse_I.D._356'],'PC.481': ['ACCAGCGACTAG','YATGCTGCCTCCCGTAGGAGT','Control','20070314','Control_mouse_I.D._481'],'PC.354': ['AGCACGAGCCTA','YATGCTGCCTCCCGTAGGAGT','Control','20061218','Control_mouse_I.D._354'] };
var g_animatableMappingFileHeaders = [];
"""

MAPPING_FILE_JS_WITH_ANIMATABLE_CATEGORIES = """var g_mappingFileHeaders = ['BarcodeSequence','LinkerPrimerSequence','Treatment','DOB','Description'];
var g_mappingFileData = { 'PC.636': ['ACGGTGAGTGTC','YATGCTGCCTCCCGTAGGAGT','Fast','20080116','Fasting_mouse_I.D._636'],'PC.355': ['AACTCGTCGATG','YATGCTGCCTCCCGTAGGAGT','Control','20061218','Control_mouse_I.D._355'],'PC.607': ['AACTGTGCGTAC','YATGCTGCCTCCCGTAGGAGT','Fast','20071112','Fasting_mouse_I.D._607'],'PC.634': ['ACAGAGTCGGCT','YATGCTGCCTCCCGTAGGAGT','Fast','20080116','Fasting_mouse_I.D._634'],'PC.635': ['ACCGCAGAGTCA','YATGCTGCCTCCCGTAGGAGT','Fast','20080116','Fasting_mouse_I.D._635'],'PC.593': ['AGCAGCACTTGT','YATGCTGCCTCCCGTAGGAGT','Control','20071210','Control_mouse_I.D._593'],'PC.356': ['ACAGACCACTCA','YATGCTGCCTCCCGTAGGAGT','Control','20061126','Control_mouse_I.D._356'],'PC.481': ['ACCAGCGACTAG','YATGCTGCCTCCCGTAGGAGT','Control','20070314','Control_mouse_I.D._481'],'PC.354': ['AGCACGAGCCTA','YATGCTGCCTCCCGTAGGAGT','Control','20061218','Control_mouse_I.D._354'] };
var g_animatableMappingFileHeaders = ['DOB'];
"""


TAXA_JS_STRING = """
var g_taxaPositions = new Array();
g_taxaPositions['0'] = { 'lineage': 'Root;k__Bacteria;p__Firmicutes', 'x': 0.280399, 'y': -0.006013, 'z': 0.023485, 'radius': 5.000000};
g_taxaPositions['1'] = { 'lineage': 'Root;k__Bacteria;p__Bacteroidetes', 'x': 0.228820, 'y': -0.130142, 'z': -0.287149, 'radius': 3.491237};
g_taxaPositions['2'] = { 'lineage': 'Root;k__Bacteria;p__Tenericutes', 'x': -0.091330, 'y': 0.424147, 'z': -0.135627, 'radius': 0.868694};
g_taxaPositions['3'] = { 'lineage': 'Root;k__Bacteria;Other', 'x': -0.276542, 'y': -0.144964, 'z': 0.066647, 'radius': 0.696843};

"""

VECTOR_JS_STRING_NO_SORTING = """
var g_vectorPositions = new Array();
g_vectorPositions['Control'] = new Array();
g_vectorPositions['Control']['PC.354'] = [-0.293353176, 0.0183956004, 0.0329884266];
g_vectorPositions['Control']['PC.355'] = [-0.109166142, 0.0877774496, 0.0115866606];
g_vectorPositions['Control']['PC.356'] = [-0.183191151, 34912.621, 0.00869481594];
g_vectorPositions['Control']['PC.481'] = [-0.192382819, 0.0147832029, -0.0147871039];
g_vectorPositions['Control']['PC.593'] = [0.0968466168, -0.159388265, 0.135271607];
g_vectorPositions['Fast'] = new Array();
g_vectorPositions['Fast']['PC.607'] = [0.0688959784, -0.166234067, -0.0998300962];
g_vectorPositions['Fast']['PC.634'] = [0.20468454, 0.128911236, -0.0293614192];
g_vectorPositions['Fast']['PC.635'] = [0.12613151, -0.00266030272, -0.141717093];
g_vectorPositions['Fast']['PC.636'] = [0.281534642, 0.0710660196, 0.097154202];
"""

VECTOR_JS_STRING_SORTING = """
var g_vectorPositions = new Array();
g_vectorPositions['Control'] = new Array();
g_vectorPositions['Control']['PC.356'] = [-0.183191151, 34912.621, 0.00869481594];
g_vectorPositions['Control']['PC.354'] = [-0.293353176, 0.0183956004, 0.0329884266];
g_vectorPositions['Control']['PC.355'] = [-0.109166142, 0.0877774496, 0.0115866606];
g_vectorPositions['Control']['PC.481'] = [-0.192382819, 0.0147832029, -0.0147871039];
g_vectorPositions['Control']['PC.593'] = [0.0968466168, -0.159388265, 0.135271607];
g_vectorPositions['Fast'] = new Array();
g_vectorPositions['Fast']['PC.607'] = [0.0688959784, -0.166234067, -0.0998300962];
g_vectorPositions['Fast']['PC.634'] = [0.20468454, 0.128911236, -0.0293614192];
g_vectorPositions['Fast']['PC.635'] = [0.12613151, -0.00266030272, -0.141717093];
g_vectorPositions['Fast']['PC.636'] = [0.281534642, 0.0710660196, 0.097154202];
"""

COMPARISON_JS_STRING = """
var g_comparisonPositions = new Array();
var g_isSerialComparisonPlot = true;
g_comparisonPositions['sampa'] = [[-0.0677, -2.036, 0.2726], [-0.972, 0.551, 1.144], [0.2339, -0.88, -1.753]];
g_comparisonPositions['sampb'] = [[-1.782, -0.972, 0.1582], [1.438, -2.603, -1.39], [0.436, 2.12, -0.935]];
g_comparisonPositions['sampc'] = [[-0.659, -0.2566, 0.514], [-0.356, 0.0875, 0.772], [-0.88, 1.069, 1.069]];
g_comparisonPositions['sampd'] = [[-1.179, -0.968, 2.525], [1.512, -1.239, -0.0365], [0.294, 0.2988, 0.0467]];
g_comparisonPositions['sampe'] = [[-0.896, -1.765, 0.274], [1.17, 1.31, -1.407], [1.64, 0.2485, -0.354]];
g_comparisonPositions['sampf'] = [[-0.0923, 1.414, -0.622], [2.618, 0.739, -0.01295], [0.821, -1.13, -1.794]];
"""

COMPARISON_JS_STRING_NON_SERIAL = """
var g_comparisonPositions = new Array();
var g_isSerialComparisonPlot = false;
g_comparisonPositions['sampa'] = [[-0.0677, -2.036, 0.2726], [-0.972, 0.551, 1.144], [0.2339, -0.88, -1.753]];
g_comparisonPositions['sampb'] = [[-1.782, -0.972, 0.1582], [1.438, -2.603, -1.39], [0.436, 2.12, -0.935]];
g_comparisonPositions['sampc'] = [[-0.659, -0.2566, 0.514], [-0.356, 0.0875, 0.772], [-0.88, 1.069, 1.069]];
g_comparisonPositions['sampd'] = [[-1.179, -0.968, 2.525], [1.512, -1.239, -0.0365], [0.294, 0.2988, 0.0467]];
g_comparisonPositions['sampe'] = [[-0.896, -1.765, 0.274], [1.17, 1.31, -1.407], [1.64, 0.2485, -0.354]];
g_comparisonPositions['sampf'] = [[-0.0923, 1.414, -0.622], [2.618, 0.739, -0.01295], [0.821, -1.13, -1.794]];
"""

COMPARISON_COORDS_HEADERS_ZERO = """
var g_comparisonPositions = new Array();
var g_isSerialComparisonPlot = false;
g_comparisonPositions['sampa0'] = [[-0.0677, -2.036, 0.2726], [-0.972, 0.551, 1.144], [0.2339, -0.88, -1.753]];
g_comparisonPositions['sampb0'] = [[-1.782, -0.972, 0.1582], [1.438, -2.603, -1.39], [0.436, 2.12, -0.935]];
g_comparisonPositions['sampc0'] = [[-0.659, -0.2566, 0.514], [-0.356, 0.0875, 0.772], [-0.88, 1.069, 1.069]];
g_comparisonPositions['sampd00'] = [[-1.179, -0.968, 2.525], [1.512, -1.239, -0.0365], [0.294, 0.2988, 0.0467]];
g_comparisonPositions['sampe00'] = [[-0.896, -1.765, 0.274], [1.17, 1.31, -1.407], [1.64, 0.2485, -0.354]];
g_comparisonPositions['sampf00'] = [[-0.0923, 1.414, -0.622], [2.618, 0.739, -0.01295], [0.821, -1.13, -1.794]];
"""

EXPECTED_FOOTER_A =\
"""document.getElementById("logo").style.display = 'none';
document.getElementById("logotable").style.display = 'none';

 </script>
</head>

<body>

<div id="overlay">
    <div>
    <img src="emperor_required_resources/img/emperor.png" alt="Emperor" id="small-logo"/>
        <h1>WebGL is not enabled!</h1>
        <p>Emperor's visualization framework is WebGL based, it seems that your system doesn't have this resource available. Here is what you can do:</p>
        <p id="explanation"><strong>Chrome:</strong> Type "chrome://flags/" into the address bar, then search for "Disable WebGL". Disable this option if you haven't already. <em>Note:</em> If you follow these steps and still don't see an image, go to "chrome://flags/" and then search for "Override software rendering list" and enable this option.</p>
        <p id="explanation"><strong>Safari:</strong> Open Safari's menu and select Preferences. Click on the advanced tab, and then check "Show Developer" menu. Then open the "Developer" menu and select "Enable WebGL".</p>
        <p id="explanation"><strong>Firefox:</strong> Go to Options through Firefox > Options or Tools > Options. Go to Advanced, then General. Check "Use hardware acceleration when available" and restart Firefox.</p>
        <p id="explanation"><strong>Other browsers:</strong> The only browsers that support WebGL are Chrome, Safari, and Firefox. Please switch to these browsers when using Emperor.</p>
        <p id="explanation"><em>Note:</em> Once you went through these changes, reload the page and it should work!</p>
        <p id="source">Sources: Instructions for <a href="https://www.biodigitalhuman.com/home/enabling-webgl.html">Chrome and Safari</a>, and <a href="http://www.infewbytes.com/?p=144">Firefox</a></p>
    </div>
</div>

<div id="emperor-plot-toggle">
    <form>
      <div id="plottype">
        <input id="pcoa" type="radio" id="pcoa" name="plottype" checked="checked" /><label for="pcoa">PCoA</label>
        <input id="parallel" type="radio" id="parallel" name="plottype" /><label for="parallel">Parallel</label>
      </div>
    </form>
</div>
<div id="pcoaPlotWrapper" class="emperor-plot-wrapper">
    <label id="pointCount" class="ontop">
    </label>

    <div id="finder" class="arrow-right">
    </div>

    <div id="labels" class="unselectable">
    </div>

    <div id="taxalabels" class="unselectable">
    </div>

    <div id="axislabels" class="axis-labels">
    </div>

    <div id="main-plot">
    </div>
</div>

<div id="parallelPlotWrapper" class="emperor-plot-wrapper">
</div>

<div id="emperor-separator" class="emperor-separator" ondblclick="separatorDoubleClick()"></div>

<div id="emperor-menu">
    <div id="emperor-menu-tabs">
        <ul id="emperor-menu-list">
            <li><a href="#keytab">Key</a></li>
            <li><a href="#colorby">Colors</a></li>
            <li><a href="#showby">Visibility</a></li>
            <li><a href="#scalingby">Scaling</a></li>
            <li><a href="#labelby">Labels</a></li>
            <li><a href="#axes">Axes</a></li>
            <li><a href="#animations">Animations</a></li>
            <li><a href="#options">Options</a></li>
        </ul>
        <div id="keytab" class="emperor-tab-div">
            <form name="keyFilter">
                <label>Filter  </label><input name="filterBox" id="searchBox" type="text" onkeyup="filterKey()"></input>
            </form>
            <div id="key">
            </div>
        </div>
        <div id="colorby" class="emperor-tab-div">
            <select id="colormap-drop-down" class="emperor-tab-drop-down" onchange="colorByMenuChanged()"></select>
            <br><br>
            <select id="colorbycombo" onchange="colorByMenuChanged()" class="emperor-tab-drop-down">
            </select>
            <div class="list" id="colorbylist">
            </div>
        </div>
        <div id="showby" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr>
                    <td>
                        <select id="showbycombo" onchange="showByMenuChanged()" class="emperor-tab-drop-down">
                        </select>
                    </td>
                </tr>
                <tr>
                    <td>
                        <div class="list" id="showbylist" style="height:100%;width:100%">
                        </div>
                    </td>
                </tr>
                <tr>
                    <td style="padding-left: 12px; padding-right:12px;">
                        <hr class='section-break'>
                        <br>
                        <label for="sphereopacity" class="text">Global Sphere Opacity</label>
                        <label id="sphereopacity" class="slidervalue"></label>
                        <div id="sopacityslider" class="slider-range-max"></div>
                    </td>
                </tr>
                <tr>
                    <td align="center">
                        <button id="toggle-visibility-selection-button" onClick="toggleVisibleCategories()">Invert Selected</button>
                    </td>
                </tr>
            </table>
        </div>
        <div id="scalingby" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr>
                    <td>
                        <select id="scalingbycombo" onchange="scalingByMenuChanged()" class="emperor-tab-drop-down">
                        </select>
                    </td>
                </tr>
                <tr>
                    <td>
                        <div class="list" id="scalingbylist" style="height:100%;width:100%">
                        </div>
                    </td>
                </tr>
                <tr>
                    <td style="padding-left: 12px; padding-right:12px;">
                        <hr class='section-break'>
                        <br>
                        <label for="sphereradius" class="text">Global Sphere Scale</label>
                        <label id="sphereradius" class="slidervalue"></label>
                        <div id="sradiusslider" class="slider-range-max"></div>
                    </td>
                </tr>
            </table>
        </div>
        <div id="labelby" class="emperor-tab-div">
            <div id="labels-top">
                <form name="plotoptions">
                    <input type="checkbox" onClick="toggleLabels()">Samples Label Visibility</input>
                </form>
                <br>
                <label for="labelopacity" class="text">Label Opacity</label>
                <label id="labelopacity" class="slidervalue"></label>
                <div id="lopacityslider" class="slider-range-max"></div>
                <div id="label-color-holder clearfix">
                    <table class="emperor-tab-table">
                        <tr><td><div id="labelColor" class="colorbox"></div></td><td><label>Master Label Color</label></td></tr>
                        <br><br>
                </table></div>
            </div>
            <br>
            <select id="labelcombo" onchange="labelMenuChanged()" class="emperor-tab-drop-down">
            </select>
            <div class="list" id="label-list">
            </div>
        </div>
        <div id="axes" class="emperor-tab-div">
            <div id="pcoaaxes">
                <div class="list" id="axeslist">
                </div>
            </div>
        </div>
        <div id="animations" class="emperor-tab-div">
            <table class="emperor-tab-table-with-sliders">
                <tr>
                    <td>
                        <a id="reset-button" class="media-button" href="javascript:void(0);" onclick="javascript:resetAnimation()"><img src="emperor_required_resources/img/reset.png" ></img></a>
                        <a id="play-button" class="media-button" href="javascript:void(0);" onclick="javascript:playAnimation()"><img src="emperor_required_resources/img/play.png"></img></a>
                        <a id="pause-button" class="media-button" href="javascript:void(0);" onclick="javascript:pauseAnimation()"><img src="emperor_required_resources/img/pause.png"></img></a>
                    </td>
                </tr>
                <tr>
                    <td>
                        <label for="animation-speed" class="text">Speed</label>
                        <label id="animation-speed" class="slidervalue"></label>
                        <div id="animation-speed-slider" class="slider-range-max"></div>
                        <div id="labelColorHolder clearfix">
                    </td>
                </tr>
                <tr>
                    <td>
                        <br><label for="gradient-category-drop-down" class="text">Gradient Category</label><br>
                    </td>
                </tr>
                <tr>
                    <td>
                        <select id="gradient-category-drop-down" class="emperor-tab-drop-down"></select><br>
                    </td>
                </tr>

                <tr>
                    <td>
                        <label for="trajectory-category-drop-down" class="text">Trajectory Category</label>
                    </td>
                </tr>
                <tr>
                    <td>
                        <select id="trajectory-category-drop-down" class="emperor-tab-drop-down" onchange="colorAnimationsByCategoryChanged()"></select>
                    </td>
                </tr>
                <tr>
                    <td id="emperor-animation-color-selector">
                    </td>
                </tr>
            </table>
        </div>
        <div id="options" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr><td><div id="axeslabelscolor" class="colorbox" name="axeslabelscolor"></div></td><td title="Axes Labels Color">Axes Labels Color</td></tr>
                <tr><td><div id="axescolor" class="colorbox" name="axescolor"></div></td><td title="Axes Color Title">Axes Color</td></tr>
                <tr><td><div id="rendererbackgroundcolor" class="colorbox" name="rendererbackgroundcolor"></div></td><td title="Background Color Title">Background Color</td></tr>
                <tr><td colspan="2">
                        <div id="pcoaviewoptions" class="">
            <br>
            <label for="ellipseopacity" class="text">Ellipse Opacity</label>
            <label id="ellipseopacity" class="slidervalue"></label>
            <div id="eopacityslider" class="slider-range-max"></div>
                            <form name="settingsoptionscolor">
                            </form>
                            <div id="pcoaoptions" class="">
                                <form name="settingsoptions">
                                    <input type="checkbox" onchange="toggleScaleCoordinates(this)" id="scale_checkbox" name="scale_checkbox">Scale coords by percent explained</input>
                                </form>
                            </div>
                            <br><input id="reset" class="button" type="submit" value="Recenter Camera" style="" onClick="resetCamera()">
                            <br><br>
                            <hr class='section-break'>
                            <br>Filename <small>(only letters, numbers, ., - and _)</small>:
                            <br><input name="saveas_name" id="saveas_name" value="screenshot" type="text"/>
                            <br><input id="saveas_legends" class="checkbox" type="checkbox" style=""> Create legend
                            <input id="saveas" class="button" type="submit" value="Save as SVG" style="" onClick="saveSVG()"/>
                            <br><br>For a PNG, simply press 'ctrl+p'.
                            <div id="paralleloptions" class="">
                            </div>
                        </div>
                        <br>
                </td></tr>
            </table>
        </div>
    </div>
</div>
</body>

</html>
"""

EXPECTED_FOOTER_B =\
"""document.getElementById("logo").style.display = 'none';
document.getElementById("logotable").style.display = 'none';

 </script>
</head>

<body>

<div id="overlay">
    <div>
    <img src="emperor_required_resources/img/emperor.png" alt="Emperor" id="small-logo"/>
        <h1>WebGL is not enabled!</h1>
        <p>Emperor's visualization framework is WebGL based, it seems that your system doesn't have this resource available. Here is what you can do:</p>
        <p id="explanation"><strong>Chrome:</strong> Type "chrome://flags/" into the address bar, then search for "Disable WebGL". Disable this option if you haven't already. <em>Note:</em> If you follow these steps and still don't see an image, go to "chrome://flags/" and then search for "Override software rendering list" and enable this option.</p>
        <p id="explanation"><strong>Safari:</strong> Open Safari's menu and select Preferences. Click on the advanced tab, and then check "Show Developer" menu. Then open the "Developer" menu and select "Enable WebGL".</p>
        <p id="explanation"><strong>Firefox:</strong> Go to Options through Firefox > Options or Tools > Options. Go to Advanced, then General. Check "Use hardware acceleration when available" and restart Firefox.</p>
        <p id="explanation"><strong>Other browsers:</strong> The only browsers that support WebGL are Chrome, Safari, and Firefox. Please switch to these browsers when using Emperor.</p>
        <p id="explanation"><em>Note:</em> Once you went through these changes, reload the page and it should work!</p>
        <p id="source">Sources: Instructions for <a href="https://www.biodigitalhuman.com/home/enabling-webgl.html">Chrome and Safari</a>, and <a href="http://www.infewbytes.com/?p=144">Firefox</a></p>
    </div>
</div>

<div id="emperor-plot-toggle">
    <form>
      <div id="plottype">
        <input id="pcoa" type="radio" id="pcoa" name="plottype" checked="checked" /><label for="pcoa">PCoA</label>
        <input id="parallel" type="radio" id="parallel" name="plottype" /><label for="parallel">Parallel</label>
      </div>
    </form>
</div>
<div id="pcoaPlotWrapper" class="emperor-plot-wrapper">
    <label id="pointCount" class="ontop">
    </label>

    <div id="finder" class="arrow-right">
    </div>

    <div id="labels" class="unselectable">
    </div>

    <div id="taxalabels" class="unselectable">
    </div>

    <div id="axislabels" class="axis-labels">
    </div>

    <div id="main-plot">
    </div>
</div>

<div id="parallelPlotWrapper" class="emperor-plot-wrapper">
</div>

<div id="emperor-separator" class="emperor-separator" ondblclick="separatorDoubleClick()"></div>

<div id="emperor-menu">
    <div id="emperor-menu-tabs">
        <ul id="emperor-menu-list">
            <li><a href="#keytab">Key</a></li>
            <li><a href="#colorby">Colors</a></li>
            <li><a href="#showby">Visibility</a></li>
            <li><a href="#scalingby">Scaling</a></li>
            <li><a href="#labelby">Labels</a></li>
            <li><a href="#axes">Axes</a></li>
            <li><a href="#animations">Animations</a></li>
            <li><a href="#options">Options</a></li>
        </ul>
        <div id="keytab" class="emperor-tab-div">
            <form name="keyFilter">
                <label>Filter  </label><input name="filterBox" id="searchBox" type="text" onkeyup="filterKey()"></input>
            </form>
            <div id="key">
            </div>
        </div>
        <div id="colorby" class="emperor-tab-div">
            <select id="colormap-drop-down" class="emperor-tab-drop-down" onchange="colorByMenuChanged()"></select>
            <br>
            <table>
                <tr><td><div id="taxaspherescolor" class="colorbox" name="taxaspherescolor"></div></td><td title="taxacolor">Taxa Spheres Color</td></tr>
            </table>
            <br>
            <br><br>
            <select id="colorbycombo" onchange="colorByMenuChanged()" class="emperor-tab-drop-down">
            </select>
            <div class="list" id="colorbylist">
            </div>
        </div>
        <div id="showby" class="emperor-tab-div">
            <br>
            <form name="biplotsvisibility">
            <input type="checkbox" onClick="toggleBiplotVisibility(false)" checked>Taxa Sphere Visibility</input>
            <br><br>
            <input type="checkbox" onClick="toggleBiplotVisibility(true)" checked>Taxa Arrow Visibility</input>
            </form>
            <br>
            <table class="emperor-tab-table">
                <tr>
                    <td>
                        <select id="showbycombo" onchange="showByMenuChanged()" class="emperor-tab-drop-down">
                        </select>
                    </td>
                </tr>
                <tr>
                    <td>
                        <div class="list" id="showbylist" style="height:100%;width:100%">
                        </div>
                    </td>
                </tr>
                <tr>
                    <td style="padding-left: 12px; padding-right:12px;">
                        <hr class='section-break'>
                        <br>
                        <label for="sphereopacity" class="text">Global Sphere Opacity</label>
                        <label id="sphereopacity" class="slidervalue"></label>
                        <div id="sopacityslider" class="slider-range-max"></div>
                    </td>
                </tr>
                <tr>
                    <td align="center">
                        <button id="toggle-visibility-selection-button" onClick="toggleVisibleCategories()">Invert Selected</button>
                    </td>
                </tr>
            </table>
        </div>
        <div id="scalingby" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr>
                    <td>
                        <select id="scalingbycombo" onchange="scalingByMenuChanged()" class="emperor-tab-drop-down">
                        </select>
                    </td>
                </tr>
                <tr>
                    <td>
                        <div class="list" id="scalingbylist" style="height:100%;width:100%">
                        </div>
                    </td>
                </tr>
                <tr>
                    <td style="padding-left: 12px; padding-right:12px;">
                        <hr class='section-break'>
                        <br>
                        <label for="sphereradius" class="text">Global Sphere Scale</label>
                        <label id="sphereradius" class="slidervalue"></label>
                        <div id="sradiusslider" class="slider-range-max"></div>
                    </td>
                </tr>
            </table>
        </div>
        <div id="labelby" class="emperor-tab-div">
            <div id="labels-top">
                <form name="plotoptions">
                    <input type="checkbox" onClick="toggleLabels()">Samples Label Visibility</input>
                </form>
            <form name="biplotoptions">
            <input type="checkbox" onClick="toggleTaxaLabels()">Biplots Label Visibility</input>
            </form>
            <br>
            <p>Visible Taxonomy Level: <span id="taxaLevel"></span></p>
            <div id="selectTaxaLevel"></div>
                <br>
                <label for="labelopacity" class="text">Label Opacity</label>
                <label id="labelopacity" class="slidervalue"></label>
                <div id="lopacityslider" class="slider-range-max"></div>
                <div id="label-color-holder clearfix">
                    <table class="emperor-tab-table">
                        <tr><td><div id="labelColor" class="colorbox"></div></td><td><label>Master Label Color</label></td></tr>
            <tr><td><div id="taxalabelcolor" class="colorbox"></div></td><td><label>Taxa Label Color</label></td></tr>

                        <br><br>
                </table></div>
            </div>
            <br>
            <select id="labelcombo" onchange="labelMenuChanged()" class="emperor-tab-drop-down">
            </select>
            <div class="list" id="label-list">
            </div>
        </div>
        <div id="axes" class="emperor-tab-div">
            <div id="pcoaaxes">
                <div class="list" id="axeslist">
                </div>
            </div>
        </div>
        <div id="animations" class="emperor-tab-div">
            <table class="emperor-tab-table-with-sliders">
                <tr>
                    <td>
                        <a id="reset-button" class="media-button" href="javascript:void(0);" onclick="javascript:resetAnimation()"><img src="emperor_required_resources/img/reset.png" ></img></a>
                        <a id="play-button" class="media-button" href="javascript:void(0);" onclick="javascript:playAnimation()"><img src="emperor_required_resources/img/play.png"></img></a>
                        <a id="pause-button" class="media-button" href="javascript:void(0);" onclick="javascript:pauseAnimation()"><img src="emperor_required_resources/img/pause.png"></img></a>
                    </td>
                </tr>
                <tr>
                    <td>
                        <label for="animation-speed" class="text">Speed</label>
                        <label id="animation-speed" class="slidervalue"></label>
                        <div id="animation-speed-slider" class="slider-range-max"></div>
                        <div id="labelColorHolder clearfix">
                    </td>
                </tr>
                <tr>
                    <td>
                        <br><label for="gradient-category-drop-down" class="text">Gradient Category</label><br>
                    </td>
                </tr>
                <tr>
                    <td>
                        <select id="gradient-category-drop-down" class="emperor-tab-drop-down"></select><br>
                    </td>
                </tr>

                <tr>
                    <td>
                        <label for="trajectory-category-drop-down" class="text">Trajectory Category</label>
                    </td>
                </tr>
                <tr>
                    <td>
                        <select id="trajectory-category-drop-down" class="emperor-tab-drop-down" onchange="colorAnimationsByCategoryChanged()"></select>
                    </td>
                </tr>
                <tr>
                    <td id="emperor-animation-color-selector">
                    </td>
                </tr>
            </table>
        </div>
        <div id="options" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr><td><div id="axeslabelscolor" class="colorbox" name="axeslabelscolor"></div></td><td title="Axes Labels Color">Axes Labels Color</td></tr>
                <tr><td><div id="axescolor" class="colorbox" name="axescolor"></div></td><td title="Axes Color Title">Axes Color</td></tr>
                <tr><td><div id="rendererbackgroundcolor" class="colorbox" name="rendererbackgroundcolor"></div></td><td title="Background Color Title">Background Color</td></tr>
                <tr><td colspan="2">
                        <div id="pcoaviewoptions" class="">
                            <form name="settingsoptionscolor">
                            </form>
                            <div id="pcoaoptions" class="">
                                <form name="settingsoptions">
                                    <input type="checkbox" onchange="toggleScaleCoordinates(this)" id="scale_checkbox" name="scale_checkbox">Scale coords by percent explained</input>
                                </form>
                            </div>
                            <br><input id="reset" class="button" type="submit" value="Recenter Camera" style="" onClick="resetCamera()">
                            <br><br>
                            <hr class='section-break'>
                            <br>Filename <small>(only letters, numbers, ., - and _)</small>:
                            <br><input name="saveas_name" id="saveas_name" value="screenshot" type="text"/>
                            <br><input id="saveas_legends" class="checkbox" type="checkbox" style=""> Create legend
                            <input id="saveas" class="button" type="submit" value="Save as SVG" style="" onClick="saveSVG()"/>
                            <br><br>For a PNG, simply press 'ctrl+p'.
                            <div id="paralleloptions" class="">
                            </div>
                        </div>
                        <br>
                </td></tr>
            </table>
        </div>
    </div>
</div>
</body>

</html>
"""

EXPECTED_FOOTER_C =\
"""document.getElementById("logo").style.display = 'none';
document.getElementById("logotable").style.display = 'none';

 </script>
</head>

<body>

<div id="overlay">
    <div>
    <img src="emperor_required_resources/img/emperor.png" alt="Emperor" id="small-logo"/>
        <h1>WebGL is not enabled!</h1>
        <p>Emperor's visualization framework is WebGL based, it seems that your system doesn't have this resource available. Here is what you can do:</p>
        <p id="explanation"><strong>Chrome:</strong> Type "chrome://flags/" into the address bar, then search for "Disable WebGL". Disable this option if you haven't already. <em>Note:</em> If you follow these steps and still don't see an image, go to "chrome://flags/" and then search for "Override software rendering list" and enable this option.</p>
        <p id="explanation"><strong>Safari:</strong> Open Safari's menu and select Preferences. Click on the advanced tab, and then check "Show Developer" menu. Then open the "Developer" menu and select "Enable WebGL".</p>
        <p id="explanation"><strong>Firefox:</strong> Go to Options through Firefox > Options or Tools > Options. Go to Advanced, then General. Check "Use hardware acceleration when available" and restart Firefox.</p>
        <p id="explanation"><strong>Other browsers:</strong> The only browsers that support WebGL are Chrome, Safari, and Firefox. Please switch to these browsers when using Emperor.</p>
        <p id="explanation"><em>Note:</em> Once you went through these changes, reload the page and it should work!</p>
        <p id="source">Sources: Instructions for <a href="https://www.biodigitalhuman.com/home/enabling-webgl.html">Chrome and Safari</a>, and <a href="http://www.infewbytes.com/?p=144">Firefox</a></p>
    </div>
</div>

<div id="emperor-plot-toggle">
    <form>
      <div id="plottype">
        <input id="pcoa" type="radio" id="pcoa" name="plottype" checked="checked" /><label for="pcoa">PCoA</label>
        <input id="parallel" type="radio" id="parallel" name="plottype" /><label for="parallel">Parallel</label>
      </div>
    </form>
</div>
<div id="pcoaPlotWrapper" class="emperor-plot-wrapper">
    <label id="pointCount" class="ontop">
    </label>

    <div id="finder" class="arrow-right">
    </div>

    <div id="labels" class="unselectable">
    </div>

    <div id="taxalabels" class="unselectable">
    </div>

    <div id="axislabels" class="axis-labels">
    </div>

    <div id="main-plot">
    </div>
</div>

<div id="parallelPlotWrapper" class="emperor-plot-wrapper">
</div>

<div id="emperor-separator" class="emperor-separator" ondblclick="separatorDoubleClick()"></div>

<div id="emperor-menu">
    <div id="emperor-menu-tabs">
        <ul id="emperor-menu-list">
            <li><a href="#keytab">Key</a></li>
            <li><a href="#colorby">Colors</a></li>
            <li><a href="#showby">Visibility</a></li>
            <li><a href="#scalingby">Scaling</a></li>
            <li><a href="#labelby">Labels</a></li>
            <li><a href="#axes">Axes</a></li>
            <li><a href="#animations">Animations</a></li>
            <li><a href="#options">Options</a></li>
        </ul>
        <div id="keytab" class="emperor-tab-div">
            <form name="keyFilter">
                <label>Filter  </label><input name="filterBox" id="searchBox" type="text" onkeyup="filterKey()"></input>
            </form>
            <div id="key">
            </div>
        </div>
        <div id="colorby" class="emperor-tab-div">
            <select id="colormap-drop-down" class="emperor-tab-drop-down" onchange="colorByMenuChanged()"></select>
            <br><br>
            <select id="colorbycombo" onchange="colorByMenuChanged()" class="emperor-tab-drop-down">
            </select>
            <div class="list" id="colorbylist">
            </div>
        </div>
        <div id="showby" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr>
                    <td>
                        <select id="showbycombo" onchange="showByMenuChanged()" class="emperor-tab-drop-down">
                        </select>
                    </td>
                </tr>
                <tr>
                    <td>
                        <div class="list" id="showbylist" style="height:100%;width:100%">
                        </div>
                    </td>
                </tr>
                <tr>
                    <td style="padding-left: 12px; padding-right:12px;">
                        <hr class='section-break'>
                        <br>
                        <label for="sphereopacity" class="text">Global Sphere Opacity</label>
                        <label id="sphereopacity" class="slidervalue"></label>
                        <div id="sopacityslider" class="slider-range-max"></div>
                    </td>
                </tr>
                <tr>
                    <td align="center">
                        <button id="toggle-visibility-selection-button" onClick="toggleVisibleCategories()">Invert Selected</button>
                    </td>
                </tr>
            </table>
        </div>
        <div id="scalingby" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr>
                    <td>
                        <select id="scalingbycombo" onchange="scalingByMenuChanged()" class="emperor-tab-drop-down">
                        </select>
                    </td>
                </tr>
                <tr>
                    <td>
                        <div class="list" id="scalingbylist" style="height:100%;width:100%">
                        </div>
                    </td>
                </tr>
                <tr>
                    <td style="padding-left: 12px; padding-right:12px;">
                        <hr class='section-break'>
                        <br>
                        <label for="sphereradius" class="text">Global Sphere Scale</label>
                        <label id="sphereradius" class="slidervalue"></label>
                        <div id="sradiusslider" class="slider-range-max"></div>
                    </td>
                </tr>
            </table>
        </div>
        <div id="labelby" class="emperor-tab-div">
            <div id="labels-top">
                <form name="plotoptions">
                    <input type="checkbox" onClick="toggleLabels()">Samples Label Visibility</input>
                </form>
                <br>
                <label for="labelopacity" class="text">Label Opacity</label>
                <label id="labelopacity" class="slidervalue"></label>
                <div id="lopacityslider" class="slider-range-max"></div>
                <div id="label-color-holder clearfix">
                    <table class="emperor-tab-table">
                        <tr><td><div id="labelColor" class="colorbox"></div></td><td><label>Master Label Color</label></td></tr>
                        <br><br>
                </table></div>
            </div>
            <br>
            <select id="labelcombo" onchange="labelMenuChanged()" class="emperor-tab-drop-down">
            </select>
            <div class="list" id="label-list">
            </div>
        </div>
        <div id="axes" class="emperor-tab-div">
            <div id="pcoaaxes">
                <div class="list" id="axeslist">
                </div>
            </div>
        </div>
        <div id="animations" class="emperor-tab-div">
            <table class="emperor-tab-table-with-sliders">
                <tr>
                    <td>
                        <a id="reset-button" class="media-button" href="javascript:void(0);" onclick="javascript:resetAnimation()"><img src="emperor_required_resources/img/reset.png" ></img></a>
                        <a id="play-button" class="media-button" href="javascript:void(0);" onclick="javascript:playAnimation()"><img src="emperor_required_resources/img/play.png"></img></a>
                        <a id="pause-button" class="media-button" href="javascript:void(0);" onclick="javascript:pauseAnimation()"><img src="emperor_required_resources/img/pause.png"></img></a>
                    </td>
                </tr>
                <tr>
                    <td>
                        <label for="animation-speed" class="text">Speed</label>
                        <label id="animation-speed" class="slidervalue"></label>
                        <div id="animation-speed-slider" class="slider-range-max"></div>
                        <div id="labelColorHolder clearfix">
                    </td>
                </tr>
                <tr>
                    <td>
                        <br><label for="gradient-category-drop-down" class="text">Gradient Category</label><br>
                    </td>
                </tr>
                <tr>
                    <td>
                        <select id="gradient-category-drop-down" class="emperor-tab-drop-down"></select><br>
                    </td>
                </tr>

                <tr>
                    <td>
                        <label for="trajectory-category-drop-down" class="text">Trajectory Category</label>
                    </td>
                </tr>
                <tr>
                    <td>
                        <select id="trajectory-category-drop-down" class="emperor-tab-drop-down" onchange="colorAnimationsByCategoryChanged()"></select>
                    </td>
                </tr>
                <tr>
                    <td id="emperor-animation-color-selector">
                    </td>
                </tr>
            </table>
        </div>
        <div id="options" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr><td><div id="axeslabelscolor" class="colorbox" name="axeslabelscolor"></div></td><td title="Axes Labels Color">Axes Labels Color</td></tr>
                <tr><td><div id="axescolor" class="colorbox" name="axescolor"></div></td><td title="Axes Color Title">Axes Color</td></tr>
                <tr><td><div id="rendererbackgroundcolor" class="colorbox" name="rendererbackgroundcolor"></div></td><td title="Background Color Title">Background Color</td></tr>
                <tr><td colspan="2">
                        <div id="pcoaviewoptions" class="">
                            <form name="settingsoptionscolor">
                            </form>
                            <div id="pcoaoptions" class="">
                                <form name="settingsoptions">
                                    <input type="checkbox" onchange="toggleScaleCoordinates(this)" id="scale_checkbox" name="scale_checkbox">Scale coords by percent explained</input>
                                </form>
                            </div>
                            <br><input id="reset" class="button" type="submit" value="Recenter Camera" style="" onClick="resetCamera()">
                            <br><br>
                            <hr class='section-break'>
                            <br>Filename <small>(only letters, numbers, ., - and _)</small>:
                            <br><input name="saveas_name" id="saveas_name" value="screenshot" type="text"/>
                            <br><input id="saveas_legends" class="checkbox" type="checkbox" style=""> Create legend
                            <input id="saveas" class="button" type="submit" value="Save as SVG" style="" onClick="saveSVG()"/>
                            <br><br>For a PNG, simply press 'ctrl+p'.
                            <div id="paralleloptions" class="">
                            </div>
                        </div>
                        <br>
                </td></tr>
            </table>
        </div>
    </div>
</div>
</body>

</html>
"""

EXPECTED_FOOTER_D =\
"""document.getElementById("logo").style.display = 'none';
document.getElementById("logotable").style.display = 'none';

 </script>
</head>

<body>

<div id="overlay">
    <div>
    <img src="emperor_required_resources/img/emperor.png" alt="Emperor" id="small-logo"/>
        <h1>WebGL is not enabled!</h1>
        <p>Emperor's visualization framework is WebGL based, it seems that your system doesn't have this resource available. Here is what you can do:</p>
        <p id="explanation"><strong>Chrome:</strong> Type "chrome://flags/" into the address bar, then search for "Disable WebGL". Disable this option if you haven't already. <em>Note:</em> If you follow these steps and still don't see an image, go to "chrome://flags/" and then search for "Override software rendering list" and enable this option.</p>
        <p id="explanation"><strong>Safari:</strong> Open Safari's menu and select Preferences. Click on the advanced tab, and then check "Show Developer" menu. Then open the "Developer" menu and select "Enable WebGL".</p>
        <p id="explanation"><strong>Firefox:</strong> Go to Options through Firefox > Options or Tools > Options. Go to Advanced, then General. Check "Use hardware acceleration when available" and restart Firefox.</p>
        <p id="explanation"><strong>Other browsers:</strong> The only browsers that support WebGL are Chrome, Safari, and Firefox. Please switch to these browsers when using Emperor.</p>
        <p id="explanation"><em>Note:</em> Once you went through these changes, reload the page and it should work!</p>
        <p id="source">Sources: Instructions for <a href="https://www.biodigitalhuman.com/home/enabling-webgl.html">Chrome and Safari</a>, and <a href="http://www.infewbytes.com/?p=144">Firefox</a></p>
    </div>
</div>

<div id="emperor-plot-toggle">
    <form>
      <div id="plottype">
        <input id="pcoa" type="radio" id="pcoa" name="plottype" checked="checked" /><label for="pcoa">PCoA</label>
        <input id="parallel" type="radio" id="parallel" name="plottype" /><label for="parallel">Parallel</label>
      </div>
    </form>
</div>
<div id="pcoaPlotWrapper" class="emperor-plot-wrapper">
    <label id="pointCount" class="ontop">
    </label>

    <div id="finder" class="arrow-right">
    </div>

    <div id="labels" class="unselectable">
    </div>

    <div id="taxalabels" class="unselectable">
    </div>

    <div id="axislabels" class="axis-labels">
    </div>

    <div id="main-plot">
    </div>
</div>

<div id="parallelPlotWrapper" class="emperor-plot-wrapper">
</div>

<div id="emperor-separator" class="emperor-separator" ondblclick="separatorDoubleClick()"></div>

<div id="emperor-menu">
    <div id="emperor-menu-tabs">
        <ul id="emperor-menu-list">
            <li><a href="#keytab">Key</a></li>
            <li><a href="#colorby">Colors</a></li>
            <li><a href="#showby">Visibility</a></li>
            <li><a href="#scalingby">Scaling</a></li>
            <li><a href="#labelby">Labels</a></li>
            <li><a href="#axes">Axes</a></li>
            <li><a href="#animations">Animations</a></li>
            <li><a href="#options">Options</a></li>
        </ul>
        <div id="keytab" class="emperor-tab-div">
            <form name="keyFilter">
                <label>Filter  </label><input name="filterBox" id="searchBox" type="text" onkeyup="filterKey()"></input>
            </form>
            <div id="key">
            </div>
        </div>
        <div id="colorby" class="emperor-tab-div">
            <select id="colormap-drop-down" class="emperor-tab-drop-down" onchange="colorByMenuChanged()"></select>
            <br><br>
            <select id="colorbycombo" onchange="colorByMenuChanged()" class="emperor-tab-drop-down">
            </select>
            <div class="list" id="colorbylist">
            </div>
        </div>
        <div id="showby" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr>
                    <td>
                        <select id="showbycombo" onchange="showByMenuChanged()" class="emperor-tab-drop-down">
                        </select>
                    </td>
                </tr>
                <tr>
                    <td>
                        <div class="list" id="showbylist" style="height:100%;width:100%">
                        </div>
                    </td>
                </tr>
                <tr>
                    <td style="padding-left: 12px; padding-right:12px;">
                        <hr class='section-break'>
                        <br>
                        <label for="sphereopacity" class="text">Global Sphere Opacity</label>
                        <label id="sphereopacity" class="slidervalue"></label>
                        <div id="sopacityslider" class="slider-range-max"></div>
                    </td>
                </tr>
                <tr>
                    <td align="center">
                        <button id="toggle-visibility-selection-button" onClick="toggleVisibleCategories()">Invert Selected</button>
                    </td>
                </tr>
            </table>
        </div>
        <div id="scalingby" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr>
                    <td>
                        <select id="scalingbycombo" onchange="scalingByMenuChanged()" class="emperor-tab-drop-down">
                        </select>
                    </td>
                </tr>
                <tr>
                    <td>
                        <div class="list" id="scalingbylist" style="height:100%;width:100%">
                        </div>
                    </td>
                </tr>
                <tr>
                    <td style="padding-left: 12px; padding-right:12px;">
                        <hr class='section-break'>
                        <br>
                        <label for="sphereradius" class="text">Global Sphere Scale</label>
                        <label id="sphereradius" class="slidervalue"></label>
                        <div id="sradiusslider" class="slider-range-max"></div>
                    </td>
                </tr>
            </table>
        </div>
        <div id="labelby" class="emperor-tab-div">
            <div id="labels-top">
                <form name="plotoptions">
                    <input type="checkbox" onClick="toggleLabels()">Samples Label Visibility</input>
                </form>
                <br>
                <label for="labelopacity" class="text">Label Opacity</label>
                <label id="labelopacity" class="slidervalue"></label>
                <div id="lopacityslider" class="slider-range-max"></div>
                <div id="label-color-holder clearfix">
                    <table class="emperor-tab-table">
                        <tr><td><div id="labelColor" class="colorbox"></div></td><td><label>Master Label Color</label></td></tr>
                        <br><br>
                </table></div>
            </div>
            <br>
            <select id="labelcombo" onchange="labelMenuChanged()" class="emperor-tab-drop-down">
            </select>
            <div class="list" id="label-list">
            </div>
        </div>
        <div id="axes" class="emperor-tab-div">
            <div id="pcoaaxes">
                <div class="list" id="axeslist">
                </div>
            </div>
        </div>
        <div id="animations" class="emperor-tab-div">
            <table class="emperor-tab-table-with-sliders">
                <tr>
                    <td>
                        <a id="reset-button" class="media-button" href="javascript:void(0);" onclick="javascript:resetAnimation()"><img src="emperor_required_resources/img/reset.png" ></img></a>
                        <a id="play-button" class="media-button" href="javascript:void(0);" onclick="javascript:playAnimation()"><img src="emperor_required_resources/img/play.png"></img></a>
                        <a id="pause-button" class="media-button" href="javascript:void(0);" onclick="javascript:pauseAnimation()"><img src="emperor_required_resources/img/pause.png"></img></a>
                    </td>
                </tr>
                <tr>
                    <td>
                        <label for="animation-speed" class="text">Speed</label>
                        <label id="animation-speed" class="slidervalue"></label>
                        <div id="animation-speed-slider" class="slider-range-max"></div>
                        <div id="labelColorHolder clearfix">
                    </td>
                </tr>
                <tr>
                    <td>
                        <br><label for="gradient-category-drop-down" class="text">Gradient Category</label><br>
                    </td>
                </tr>
                <tr>
                    <td>
                        <select id="gradient-category-drop-down" class="emperor-tab-drop-down"></select><br>
                    </td>
                </tr>

                <tr>
                    <td>
                        <label for="trajectory-category-drop-down" class="text">Trajectory Category</label>
                    </td>
                </tr>
                <tr>
                    <td>
                        <select id="trajectory-category-drop-down" class="emperor-tab-drop-down" onchange="colorAnimationsByCategoryChanged()"></select>
                    </td>
                </tr>
                <tr>
                    <td id="emperor-animation-color-selector">
                    </td>
                </tr>
            </table>
        </div>
        <div id="options" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr><td><div id="axeslabelscolor" class="colorbox" name="axeslabelscolor"></div></td><td title="Axes Labels Color">Axes Labels Color</td></tr>
                <tr><td><div id="axescolor" class="colorbox" name="axescolor"></div></td><td title="Axes Color Title">Axes Color</td></tr>
                <tr><td><div id="rendererbackgroundcolor" class="colorbox" name="rendererbackgroundcolor"></div></td><td title="Background Color Title">Background Color</td></tr>
                <tr><td colspan="2">
                        <div id="pcoaviewoptions" class="">
            <br>
            <label for="vectorsopacity" class="text">Vectors Opacity</label>
            <label id="vectorsopacity" class="slidervalue"></label>
            <div id="vopacityslider" class="slider-range-max"></div>
                            <form name="settingsoptionscolor">
                            </form>
                            <div id="pcoaoptions" class="">
                                <form name="settingsoptions">
                                    <input type="checkbox" onchange="toggleScaleCoordinates(this)" id="scale_checkbox" name="scale_checkbox">Scale coords by percent explained</input>
                                </form>
                            </div>
                            <br><input id="reset" class="button" type="submit" value="Recenter Camera" style="" onClick="resetCamera()">
                            <br><br>
                            <hr class='section-break'>
                            <br>Filename <small>(only letters, numbers, ., - and _)</small>:
                            <br><input name="saveas_name" id="saveas_name" value="screenshot" type="text"/>
                            <br><input id="saveas_legends" class="checkbox" type="checkbox" style=""> Create legend
                            <input id="saveas" class="button" type="submit" value="Save as SVG" style="" onClick="saveSVG()"/>
                            <br><br>For a PNG, simply press 'ctrl+p'.
                            <div id="paralleloptions" class="">
                            </div>
                        </div>
                        <br>
                </td></tr>
            </table>
        </div>
    </div>
</div>
</body>

</html>
"""

EXPECTED_FOOTER_E =\
"""document.getElementById("logo").style.display = 'none';
document.getElementById("logotable").style.display = 'none';

 </script>
</head>

<body>

<div id="overlay">
    <div>
    <img src="emperor_required_resources/img/emperor.png" alt="Emperor" id="small-logo"/>
        <h1>WebGL is not enabled!</h1>
        <p>Emperor's visualization framework is WebGL based, it seems that your system doesn't have this resource available. Here is what you can do:</p>
        <p id="explanation"><strong>Chrome:</strong> Type "chrome://flags/" into the address bar, then search for "Disable WebGL". Disable this option if you haven't already. <em>Note:</em> If you follow these steps and still don't see an image, go to "chrome://flags/" and then search for "Override software rendering list" and enable this option.</p>
        <p id="explanation"><strong>Safari:</strong> Open Safari's menu and select Preferences. Click on the advanced tab, and then check "Show Developer" menu. Then open the "Developer" menu and select "Enable WebGL".</p>
        <p id="explanation"><strong>Firefox:</strong> Go to Options through Firefox > Options or Tools > Options. Go to Advanced, then General. Check "Use hardware acceleration when available" and restart Firefox.</p>
        <p id="explanation"><strong>Other browsers:</strong> The only browsers that support WebGL are Chrome, Safari, and Firefox. Please switch to these browsers when using Emperor.</p>
        <p id="explanation"><em>Note:</em> Once you went through these changes, reload the page and it should work!</p>
        <p id="source">Sources: Instructions for <a href="https://www.biodigitalhuman.com/home/enabling-webgl.html">Chrome and Safari</a>, and <a href="http://www.infewbytes.com/?p=144">Firefox</a></p>
    </div>
</div>

<div id="emperor-plot-toggle">
    <form>
      <div id="plottype">
        <input id="pcoa" type="radio" id="pcoa" name="plottype" checked="checked" /><label for="pcoa">PCoA</label>
        <input id="parallel" type="radio" id="parallel" name="plottype" /><label for="parallel">Parallel</label>
      </div>
    </form>
</div>
<div id="pcoaPlotWrapper" class="emperor-plot-wrapper">
    <label id="pointCount" class="ontop">
    </label>

    <div id="finder" class="arrow-right">
    </div>

    <div id="labels" class="unselectable">
    </div>

    <div id="taxalabels" class="unselectable">
    </div>

    <div id="axislabels" class="axis-labels">
    </div>

    <div id="main-plot">
    </div>
</div>

<div id="parallelPlotWrapper" class="emperor-plot-wrapper">
</div>

<div id="emperor-separator" class="emperor-separator" ondblclick="separatorDoubleClick()"></div>

<div id="emperor-menu">
    <div id="emperor-menu-tabs">
        <ul id="emperor-menu-list">
            <li><a href="#keytab">Key</a></li>
            <li><a href="#colorby">Colors</a></li>
            <li><a href="#showby">Visibility</a></li>
            <li><a href="#scalingby">Scaling</a></li>
            <li><a href="#labelby">Labels</a></li>
            <li><a href="#axes">Axes</a></li>
            <li><a href="#animations">Animations</a></li>
            <li><a href="#options">Options</a></li>
        </ul>
        <div id="keytab" class="emperor-tab-div">
            <form name="keyFilter">
                <label>Filter  </label><input name="filterBox" id="searchBox" type="text" onkeyup="filterKey()"></input>
            </form>
            <div id="key">
            </div>
        </div>
        <div id="colorby" class="emperor-tab-div">
            <select id="colormap-drop-down" class="emperor-tab-drop-down" onchange="colorByMenuChanged()"></select>
            <br><br>
            <select id="colorbycombo" onchange="colorByMenuChanged()" class="emperor-tab-drop-down">
            </select>
            <div class="list" id="colorbylist">
            </div>
        </div>
        <div id="showby" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr>
                    <td>
                        <select id="showbycombo" onchange="showByMenuChanged()" class="emperor-tab-drop-down">
                        </select>
                    </td>
                </tr>
                <tr>
                    <td>
                        <div class="list" id="showbylist" style="height:100%;width:100%">
                        </div>
                    </td>
                </tr>
                <tr>
                    <td style="padding-left: 12px; padding-right:12px;">
                        <hr class='section-break'>
                        <br>
                        <label for="sphereopacity" class="text">Global Sphere Opacity</label>
                        <label id="sphereopacity" class="slidervalue"></label>
                        <div id="sopacityslider" class="slider-range-max"></div>
                    </td>
                </tr>
                <tr>
                    <td align="center">
                        <button id="toggle-visibility-selection-button" onClick="toggleVisibleCategories()">Invert Selected</button>
                    </td>
                </tr>
            </table>
        </div>
        <div id="scalingby" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr>
                    <td>
                        <select id="scalingbycombo" onchange="scalingByMenuChanged()" class="emperor-tab-drop-down">
                        </select>
                    </td>
                </tr>
                <tr>
                    <td>
                        <div class="list" id="scalingbylist" style="height:100%;width:100%">
                        </div>
                    </td>
                </tr>
                <tr>
                    <td style="padding-left: 12px; padding-right:12px;">
                        <hr class='section-break'>
                        <br>
                        <label for="sphereradius" class="text">Global Sphere Scale</label>
                        <label id="sphereradius" class="slidervalue"></label>
                        <div id="sradiusslider" class="slider-range-max"></div>
                    </td>
                </tr>
            </table>
        </div>
        <div id="labelby" class="emperor-tab-div">
            <div id="labels-top">
                <form name="plotoptions">
                    <input type="checkbox" onClick="toggleLabels()">Samples Label Visibility</input>
                </form>
                <br>
                <label for="labelopacity" class="text">Label Opacity</label>
                <label id="labelopacity" class="slidervalue"></label>
                <div id="lopacityslider" class="slider-range-max"></div>
                <div id="label-color-holder clearfix">
                    <table class="emperor-tab-table">
                        <tr><td><div id="labelColor" class="colorbox"></div></td><td><label>Master Label Color</label></td></tr>
                        <br><br>
                </table></div>
            </div>
            <br>
            <select id="labelcombo" onchange="labelMenuChanged()" class="emperor-tab-drop-down">
            </select>
            <div class="list" id="label-list">
            </div>
        </div>
        <div id="axes" class="emperor-tab-div">
            <div id="pcoaaxes">
                <div class="list" id="axeslist">
                </div>
            </div>
        </div>
        <div id="animations" class="emperor-tab-div">
            <table class="emperor-tab-table-with-sliders">
                <tr>
                    <td>
                        <a id="reset-button" class="media-button" href="javascript:void(0);" onclick="javascript:resetAnimation()"><img src="emperor_required_resources/img/reset.png" ></img></a>
                        <a id="play-button" class="media-button" href="javascript:void(0);" onclick="javascript:playAnimation()"><img src="emperor_required_resources/img/play.png"></img></a>
                        <a id="pause-button" class="media-button" href="javascript:void(0);" onclick="javascript:pauseAnimation()"><img src="emperor_required_resources/img/pause.png"></img></a>
                    </td>
                </tr>
                <tr>
                    <td>
                        <label for="animation-speed" class="text">Speed</label>
                        <label id="animation-speed" class="slidervalue"></label>
                        <div id="animation-speed-slider" class="slider-range-max"></div>
                        <div id="labelColorHolder clearfix">
                    </td>
                </tr>
                <tr>
                    <td>
                        <br><label for="gradient-category-drop-down" class="text">Gradient Category</label><br>
                    </td>
                </tr>
                <tr>
                    <td>
                        <select id="gradient-category-drop-down" class="emperor-tab-drop-down"></select><br>
                    </td>
                </tr>

                <tr>
                    <td>
                        <label for="trajectory-category-drop-down" class="text">Trajectory Category</label>
                    </td>
                </tr>
                <tr>
                    <td>
                        <select id="trajectory-category-drop-down" class="emperor-tab-drop-down" onchange="colorAnimationsByCategoryChanged()"></select>
                    </td>
                </tr>
                <tr>
                    <td id="emperor-animation-color-selector">
                    </td>
                </tr>
            </table>
        </div>
        <div id="options" class="emperor-tab-div">
            <table class="emperor-tab-table">
                <tr><td><div id="axeslabelscolor" class="colorbox" name="axeslabelscolor"></div></td><td title="Axes Labels Color">Axes Labels Color</td></tr>
                <tr><td><div id="axescolor" class="colorbox" name="axescolor"></div></td><td title="Axes Color Title">Axes Color</td></tr>
                <tr><td><div id="rendererbackgroundcolor" class="colorbox" name="rendererbackgroundcolor"></div></td><td title="Background Color Title">Background Color</td></tr>
            <tr><td><div id="edgecolorselector_a" class="colorbox" name="edgecolorselector_a"></div></td><td title="edgecolor_a">Edge Color Selector A</td></tr>
            <tr><td><div id="edgecolorselector_b" class="colorbox" name="edgecolorselector_b"></div></td><td title="edgecolor_b">Edge Color Selector B</td></tr>

                <tr><td colspan="2">
                        <div id="pcoaviewoptions" class="">
            <br>
            <form name="edgesvisibility">
            <input type="checkbox" onClick="toggleEdgesVisibility()" checked>Edges Visibility</input>
            </form>
            <br>
                            <form name="settingsoptionscolor">
                            </form>
                            <div id="pcoaoptions" class="">
                                <form name="settingsoptions">
                                    <input type="checkbox" onchange="toggleScaleCoordinates(this)" id="scale_checkbox" name="scale_checkbox">Scale coords by percent explained</input>
                                </form>
                            </div>
                            <br><input id="reset" class="button" type="submit" value="Recenter Camera" style="" onClick="resetCamera()">
                            <br><br>
                            <hr class='section-break'>
                            <br>Filename <small>(only letters, numbers, ., - and _)</small>:
                            <br><input name="saveas_name" id="saveas_name" value="screenshot" type="text"/>
                            <br><input id="saveas_legends" class="checkbox" type="checkbox" style=""> Create legend
                            <input id="saveas" class="button" type="submit" value="Save as SVG" style="" onClick="saveSVG()"/>
                            <br><br>For a PNG, simply press 'ctrl+p'.
                            <div id="paralleloptions" class="">
                            </div>
                        </div>
                        <br>
                </td></tr>
            </table>
        </div>
    </div>
</div>
</body>

</html>
"""