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Toy Model #8

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mortonjt opened this issue Jan 11, 2018 · 1 comment
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Toy Model #8

mortonjt opened this issue Jan 11, 2018 · 1 comment
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@htoo97 @kwcantrell

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@mortonjt
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mortonjt commented Jan 11, 2018 •
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Need a simple model that

  1. Calculates the coordinates of the nodes given an skbio.TreeNode object.
  2. Calculates all of the parent/child relationships
  3. Assigns metadata (i.e. edge color and node size)
  4. Outputs a node metadata pd.DataFrame and an edge metadata pd.DataFrame

See the coords method in Gneiss. It may make more sense to output the parent node rather than the children, since every node will have a parent (except for the root node).
@mortonjt mortonjt mentioned this issue Jan 11, 2018
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@htoo97
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htoo97 commented Jan 11, 2018

Default layout: radial

@mortonjt mortonjt mentioned this issue Jan 11, 2018
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@kwcantrell kwcantrell mentioned this issue Jan 18, 2018
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@mortonjt @htoo97 @kwcantrell