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  1. sequila sequila Public

    SeQuiLa: Distributed analytics for genomics based on Apache Spark!

    HTML 9 7

  2. ds-notebooks ds-notebooks Public

    Jupyter Notebook 5 2

  3. sequila-cloud-recipes sequila-cloud-recipes Public

    SeQuiLa recipes, examples and other cloud-related content

    HCL 3 1

  4. pysequila pysequila Public

    Python wrapper for SeQuiLa: Distributed analytics for genomics based on Apache Spark!

    HTML 2

  5. edugen-notebooks edugen-notebooks Public

    Jupyter Notebook 1 1

  6. disq disq Public

    Forked from disq-bio/disq

    A library for manipulating bioinformatics sequencing formats in Apache Spark

    Java 1

Repositories

Showing 10 of 35 repositories
  • ds-notebooks Public
    biodatageeks/ds-notebooks’s past year of commit activity
    Jupyter Notebook 5 Apache-2.0 2 2 1 Updated Jun 8, 2024
  • jupyter-launcher-shortcuts Public Forked from tristanlt/jupyter-launcher-shortcuts

    Launcher shortcuts for classic Jupyter Notebook & JupyterLab

    biodatageeks/jupyter-launcher-shortcuts’s past year of commit activity
    Python 0 BSD-3-Clause 10 0 0 Updated Feb 26, 2024
  • rnafusion Public Forked from nf-core/rnafusion

    RNA-seq analysis pipeline for detection gene-fusions

    biodatageeks/rnafusion’s past year of commit activity
    Nextflow 0 MIT 93 0 0 Updated Dec 1, 2023
  • rust-bio Public Forked from rust-bio/rust-bio

    This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

    biodatageeks/rust-bio’s past year of commit activity
    Rust 0 MIT 204 0 0 Updated Nov 18, 2023
  • coitrees Public Forked from dcjones/coitrees

    A very fast interval tree data structure

    biodatageeks/coitrees’s past year of commit activity
    Rust 0 MIT 7 0 0 Updated Nov 10, 2023
  • iitii Public Forked from mlin/iitii

    Implicit Interval Tree with Interpolation Index

    biodatageeks/iitii’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 4 0 0 Updated Nov 9, 2023
  • edugen-notebooks Public
    biodatageeks/edugen-notebooks’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated May 27, 2023
  • ds-images Public
    biodatageeks/ds-images’s past year of commit activity
    Shell 0 Apache-2.0 0 15 4 Updated May 25, 2023
  • sparkseq Public
    biodatageeks/sparkseq’s past year of commit activity
    Scala 0 Apache-2.0 0 0 0 Updated Mar 5, 2023
  • popgen Public
    biodatageeks/popgen’s past year of commit activity
    Scala 0 0 0 0 Updated Mar 5, 2023
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