Merge pull request #77 from bioimage-io/fix-halo

Move halo field to output tensor specification

README.md

@@ -89,7 +89,7 @@ Must be a list of *tensor specification keys*.
        - `reference_input` name of the reference input tensor
        - `scale` list of factors 'output_pix/input_pix' for each dimension
        - `offset` position of origin wrt to input 
-       - `halo` the halo to crop from the output tensor (for example to crop away boundary efects or for tiling). The halo should be croped from both sides, i.e. `shape_after_crop = shape - 2 * halo`. The `halo` is not cropped by the bioimage.io model, but is left to be cropped by the consumer software. Use `offset` if the model output itself is cropped.
+  - `halo` \[optional\] (only for output) the halo to crop from the output tensor (for example to crop away boundary efects or for tiling). The halo should be croped from both sides, i.e. `shape_after_crop = shape - 2 * halo`. The `halo` is not cropped by the bioimage.io model, but is left to be cropped by the consumer software. Use `shape:offset` if the model output itself is cropped.
   - `preprocessing` \[optional\] (only for input) list of transformations describing how this input should be preprocessed. Each entry has these keys:
     - `name` name of preprocessing (see [supported_formats_and_operations.md#preprocessing](https://github.com/bioimage-io/configuration/blob/master/supported_formats_and_operations.md#preprocessing) for valid names).
     - `kwargs` \[optional\] key word arguments for `preprocessing`.