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CIRI-vis

GitHub release (latest by date) GitHub All Releases Documentation Status

CIRI-vis is a tool for visualizing alignments of BSJ & RO merged reads and estimating the related abundance of isoforms according to the output of CIRI-full (prefix_merge_circRNA_detail.anno) or CIRI-AS (prefix_jav.list).

Documentation

Documentation is available online at https://ciri-cookbook.readthedocs.io/en/latest

Author

Authors: Yi Zheng(zhengyi@biols.ac.cn), Fangqing Zhao(zhfq@biols.ac.cn)

Maintainer: Yi Zheng

Release Notes

  • Version 1.4.1

Citing CIRI-full

Zheng, Y. & Zhao, F. Visualization of circular RNAs and their internal splicing events from transcriptomic data. Bioinformatics 36, 2934–2935 (2020) https://doi.org/10.1093/bioinformatics/btaa033

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Visualization of circular RNAs and their internal splicing events from transcriptomic data.

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