AlignmentComparator is a desktop application that visualizes differences between two alternative multiple sequence alignments of the same set of biological sequences and allows to annotate and comment the comparison. This allows life science researchers to decide which alternative alignments to take into account as the bases of e.g. a phylogenetic study or numerous other tasks.
More information can be found at http://bioinfweb.info/AlignmentComparator/.
This GitHub repository in a synchronized mirror of the master repository at bioinfweb. Feedback and pull requests are welcome.
If you want to submit a bug report or feature request, please use our public bug tracking system at http://bioinfweb.info/AlignmentComparator/Bugs. (We do not manage issues on GitHub directly.)
Binary releases can be found at http://bioinfweb.info/AlignmentComparator/Download.