Halvade, a mapreduce implementation of the best practice DNA-seq/RNA-seq pipeline by Broad Institute. More information is available in the bioinformatics paper here.
To build Halvade run this command in the
To build the Halvade uploader tool run this command in the
The documentation for Halvade is available on readthedocs.org.
There's two recipies available on the wiki page itself:
This software is available under the GPLv3 license.