Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Parse LD files with either hg19 or hg38, but not both #11

Closed
biona001 opened this issue Jun 22, 2024 · 0 comments
Closed

Parse LD files with either hg19 or hg38, but not both #11

biona001 opened this issue Jun 22, 2024 · 0 comments
Labels
enhancement New feature or request

Comments

@biona001
Copy link
Owner

The EUR LD files contain both pos_hg19 and pos_hg38.

But in the vcf branch we will soon support custom LD files constructed from individual level VCF data, which will only have either pos_hg19 or pos_hg38.
@biona001 biona001 added the enhancement New feature or request label Jun 22, 2024
@biona001 biona001 changed the title Parse LD files with only 1 POS Parse LD files with only either hg19 or hg38, but not both Jun 24, 2024
@biona001 biona001 changed the title Parse LD files with only either hg19 or hg38, but not both Parse LD files with either hg19 or hg38, but not both Jun 24, 2024
biona001 added a commit that referenced this issue Jun 25, 2024
@biona001
support ghostbasil on custom LD data (#11)
162fdcc
@biona001 biona001 mentioned this issue Jun 25, 2024
Closed
5 tasks
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement New feature or request
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@biona001