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VC with bionode-ncbi+tools (bash) with filtering #4

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thejmazz opened this Issue May 22, 2016 · 4 comments

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thejmazz commented May 22, 2016

@bmpvieira do you want to add basic filtering? or maybe give some tips/hints and I can try to add it myself. otherwise today I am going to compile my notes from the 4 papers and start playing with nextflow/snakemake if the filter stuff is not ready yet. also I think reading nextflow/snakemake might be better use of time today then experimenting myself with filtering

  • filter with khmer
  • filter with kmc

@thejmazz thejmazz referenced this issue May 22, 2016

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Week 1 #9

7 of 7 tasks complete

@thejmazz thejmazz added this to the Week 1 milestone May 23, 2016

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thejmazz commented May 25, 2016

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