/
rpsblast_no_hits.bls
58 lines (42 loc) · 1.38 KB
/
rpsblast_no_hits.bls
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
RPS-BLAST 2.2.18 [Mar-02-2008]
Database: CDD.v.2.13
24,083 sequences; 5,982,884 total letters
Searching..................................................done
Query= lcl|YP_134044.1|Plus1 F 4437 4742 NC_006391 hypothetical
protein {Haloarcula marismortui ATCC 43049}
(101 letters)
***** No hits found ******
Query= lcl|YP_134045.1|Plus1 F 4742 5065 NC_006391 transcription
regulator {Haloarcula marismortui ATCC 43049}
(107 letters)
***** No hits found ******
Query= lcl|YP_134046.1|Plus1 F 5275 5808 NC_006391 hypothetical
protein {Haloarcula marismortui ATCC 43049}
(177 letters)
***** No hits found ******
Database: CDD.v.2.13
Posted date: Nov 8, 2007 6:30 PM
Number of letters in database: 5,982,884
Number of sequences in database: 24,083
Lambda K H
0.308 0.126 0.352
Gapped
Lambda K H
0.267 0.0606 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24083
Number of Hits to DB: 200,397,591
Number of extensions: 14170162
Number of successful extensions: 17150
Number of sequences better than 1.0e-005: 6
Number of HSP's gapped: 17124
Number of HSP's successfully gapped: 29
Length of database: 5,982,884
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 6.7 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.8 bits)
S2: 102 (43.3 bits)