@bioperl

BioPerl

Free and Open Source Perl tools for bioinformatics, genomics, and life science

  • Core BioPerl 1.x code

    Perl 186 139 Updated Jul 25, 2018
  • BioPerl scripts and utilities

    Perl 8 6 Updated Jul 17, 2018
  • Perl Updated Jul 11, 2018
  • Perl Updated Jul 10, 2018
  • ASN1 parser for EntrezGene data

    Perl 2 Updated Jul 9, 2018
  • bioperl interface to PAML (Phylogenetic Analysis by Maximum Likelihood)

    Perl Updated Jul 1, 2018
  • The BioPerl Web site: http://bioperl.org

    JavaScript 10 9 Updated May 21, 2018
  • BLASTXML modules for BioPerl

    Perl Updated Jan 4, 2018
  • Low-level OO Perl interface for NCBI's eutils

    Perl 3 3 Updated Dec 12, 2017
  • BioPerl wrappers

    Perl 31 20 Updated Dec 8, 2017
  • Docker files for BioPerl

    2 Artistic-2.0 Updated Sep 28, 2017
  • Bio-Biblio

    Perl 1 1 Updated Sep 15, 2017
  • Dist::Zilla plugin bundle for Bioperl distributions

    Perl 3 2 Updated Sep 7, 2017
  • Perl 2 Updated Aug 30, 2017
  • Initial repository for microarray-based tools (may be renamed)

    Perl 1 1 Updated Aug 15, 2016
  • Modules for community biology

    Perl 2 1 Updated Jan 8, 2016
  • Analysis of protein-protein interactions

    Perl 3 2 Updated Dec 26, 2015
  • BioPerl BioSQL ORM

    Perl 7 10 Updated Dec 3, 2015
  • Legacy tickets migrated from the OBF Redmine issue tracker: http://redmine.open-bio.org

    Updated Oct 7, 2015
  • Simple Bundle module for BioPerl

    Perl Updated Jan 25, 2015
  • BioPerl BSML BLAST Result Writer

    Perl Updated Jan 9, 2015
  • Sequence Feature streams

    Perl 3 6 Updated Jan 9, 2015
  • DEPRECATED: split repository for Bio-Root modules.

    Perl 3 Updated Nov 5, 2014
  • XS-based BioPerl extensions to C libraries (defunct)

    C 2 6 Updated Sep 30, 2014
  • BioPerl assembly-related modules

    Perl 1 1 Updated Dec 20, 2013
  • Perl XS bindings to Staden's io_lib

    Perl 1 Updated Sep 26, 2013
  • BioPerl 2.x modules for representing coordinate ranges

    Perl 1 Updated Aug 17, 2011
  • Perl 2 Updated Aug 17, 2011
  • Perl 2 1 Updated Aug 3, 2011
  • Perl 2 Updated Jun 23, 2011