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fix: add BiologicalProcess KEGG back in
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colleenXu committed Jul 28, 2021
1 parent df2139c commit ccf257a
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Showing 2 changed files with 5 additions and 3 deletions.
5 changes: 3 additions & 2 deletions README.md
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Expand Up @@ -216,8 +216,9 @@ let input = {
1. GO
2. MetaCyc
3. REACT
4. name
3. KEGG
4. REACT
5. name
> AnatomicalEntity ID Resolution is done through BioThings UBERON API
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3 changes: 2 additions & 1 deletion src/config.ts
Original file line number Diff line number Diff line change
Expand Up @@ -241,13 +241,14 @@ export const APIMETA: MetaDataItemsObject = {
},
},
BiologicalProcess: {
id_ranks: ['GO', 'MetaCyc', 'REACT', 'name'],
id_ranks: ['GO', 'MetaCyc', 'REACT', 'KEGG', 'name'],
semantic: 'BiologicalProcess',
api_name: 'Gene Ontology Biological Process API',
url: 'https://biothings.ncats.io/go_bp/query',
mapping: {
GO: ['_id'],
MetaCyc: ['xrefs.metacyc'],
KEGG: ['xrefs.kegg_pathway'],
REACT: ['xrefs.reactome'],
name: ['name'],
},
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