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  1. mgtools/PEbA mgtools/PEbA Public

    Protein Embedding based Alignment

    Python 4

  2. DCTSearch DCTSearch Public

    Command-line tool for protein database searching using ESM-2 embeddings and contact maps

    Python

  3. BuffettLetters BuffettLetters Public

    NLP of Warren Buffett's annual letter to shareholders

    Jupyter Notebook

  4. genomeassembly genomeassembly Public

    Genome assembly and annotation using various tools

    Shell

  5. GlycN GlycN Public

    1D-CNN built with PyTorch to predict glycosylation of embedded asparagine residues

    Python

  6. mgtools/DCTdomain mgtools/DCTdomain Public

    protein domain-level embedding via DCT for similarity search

    Python 1