partial work towards multi api list

package.json

@@ -33,6 +33,7 @@
     "nyc": "^11.3.0"
   },
   "dependencies": {
+    "figlet": "^1.2.0",
     "through2": "^2.0.3"
   }
 }

src/Genes.js

@@ -57,11 +57,13 @@ class Genes extends NodeMist3 {
 							return gene.aseq_id === item.id
 						})[0]
 						if (!gene.ai) {
-							this.log.warn(`Aseq ${gene.aseq_id} not found`)
 							if (options.keepGoing === false) {
 								this.log.error(`Aseq ${gene.aseq_id} not found`)
 								throw Error(`Aseq ${gene.aseq_id} not found`)
 							}
+							else {
+								this.log.warn(`Aseq ${gene.aseq_id} not found`)
+							}
 						}
 					}
 					else {
@@ -157,12 +159,12 @@ class Genes extends NodeMist3 {
 		})
 	}
 
-	byGenome(version) {
+	byGenomeVersion(version) {
 		const allGenes = []
 		let page = 1
 		const getGenes = (v, p) => {
 			return new Promise((resolve, rejectg) => {
-				this.byGenomePerPage(v, p)
+				this.byGenomeVersionPerPage(v, p)
 					.then((newGenes) => {
 						if (newGenes.length !== 0) {
 							newGenes.forEach((gene) => {
@@ -180,7 +182,7 @@ class Genes extends NodeMist3 {
 		return getGenes(version, page)
 	}
 
-	byGenomePerPage(version, page = 1) {
+	byGenomeVersionPerPage(version, page = 1) {
 		const genes = []
 		const genesPerPage = 100
 		this.httpOptions.method = 'GET'

src/Genes.tests.js

@@ -14,13 +14,13 @@ const should = chai.should()
 const Genes = require('./Genes')
 
 describe('Genes', function() {
-	describe('byGenomes', function() {
+	describe('byGenomeVersion', function() {
 		it('should pass', function() {
 			this.timeout(14000)
 			const genes = new Genes()
 			const expectedNumberOfGenes = 736
 			const genome = 'GCF_000701865.1' // 'GCF_000006765.1'
-			return genes.byGenome(genome).then((items) => {
+			return genes.byGenomeVersion(genome).then((items) => {
 				expect(items.length).eql(expectedNumberOfGenes)
 			})
 		})
@@ -29,41 +29,41 @@ describe('Genes', function() {
 	describe('info', function() {
 		it('should pass', function() {
 			const genes = new Genes()
-			const geneVersion = 'GCF_000302455.1-A994_RS01985'
-			return genes.info(geneVersion).then((item) => {
-				expect(item.stable_id).eql(geneVersion)
+			const stableId = 'GCF_000302455.1-A994_RS01985'
+			return genes.info(stableId).then((item) => {
+				expect(item.stable_id).eql(stableId)
 			})
 		})
 		it('should throw error when fed with invalid id', function() {
 			const genes = new Genes()
-			const geneVersion = 'GCF_000302455.1-A994_RS0198'
-			return genes.info(geneVersion).should.be.rejectedWith(Error)
+			const stableId = 'GCF_000302455.1-A994_RS0198'
+			return genes.info(stableId).should.be.rejectedWith(Error)
 		})
 		it.skip('should throw error when fed with empty id', function() {
 			const genes = new Genes()
-			const geneVersion = ''
-			return genes.info(geneVersion).should.be.rejectedWith(Error)
+			const stableId = ''
+			return genes.info(stableId).should.be.rejectedWith(Error)
 		})
 	})
 	describe('infoAll', function() {
 		it('should pass', function() {
 			const genes = new Genes()
-			const geneVersions = ['GCF_000302455.1-A994_RS01985', 'GCF_000302455.1-A994_RS00010']
-			return genes.infoAll(geneVersions).then((items) => {
+			const stableIds = ['GCF_000302455.1-A994_RS01985', 'GCF_000302455.1-A994_RS00010']
+			return genes.infoAll(stableIds).then((items) => {
 				items.forEach((item, i) => {
-					expect(item.stable_id).eql(geneVersions[i])
+					expect(item.stable_id).eql(stableIds[i])
 				})
 			})
 		})
 		it('should be rejected with invalid stable id', function() {
 			const genes = new Genes()
-			const geneVersions = ['GCF_000302455.1-A994_RS01985', 'xxxGCF_000302455.1-A994_RS00010']
-			return genes.infoAll(geneVersions).should.be.rejectedWith('Not Found')
+			const stableIds = ['GCF_000302455.1-A994_RS01985', 'xxxGCF_000302455.1-A994_RS00010']
+			return genes.infoAll(stableIds).should.be.rejectedWith('Not Found')
 		})
 		it('should pass with bunch', function() {
 			this.timeout(14000)
 			const genes = new Genes()
-			const geneVersions = [
+			const stableIds = [
 				'GCF_000006765.1-PA1072',
 				'GCF_000006765.1-PA1073',
 				'GCF_000006765.1-PA1074',
@@ -230,9 +230,9 @@ describe('Genes', function() {
 				'GCF_000196175.1-BD_RS15605',
 				'GCF_000196175.1-BD_RS15610'
 			]
-			return genes.infoAll(geneVersions).then((items) => {
+			return genes.infoAll(stableIds).then((items) => {
 				items.forEach((item, i) => {
-					expect(item.stable_id).eql(geneVersions[i])
+					expect(item.stable_id).eql(stableIds[i])
 				})
 			})
 		})
@@ -267,8 +267,8 @@ describe('Genes', function() {
 	describe('addAseqInfo', function() {
 		it('should pass', function() {
 			const genes = new Genes()
-			const geneVersion = 'GCF_000302455.1-A994_RS01985'
-			return genes.info(geneVersion).then((gene) => {
+			const stableId = 'GCF_000302455.1-A994_RS01985'
+			return genes.info(stableId).then((gene) => {
 				return genes.addAseqInfo([gene]).then((result) => {
 					expect(result[0].ai).to.not.be.null
 					expect(result.length).eql(1)
@@ -277,24 +277,24 @@ describe('Genes', function() {
 		})
 		it('should reject if gene is not found', function() {
 			const genes = new Genes()
-			const geneVersion = 'GCF_000302455.1-A994_RS01985'
-			return genes.info(geneVersion).then((gene) => {
+			const stableId = 'GCF_000302455.1-A994_RS01985'
+			return genes.info(stableId).then((gene) => {
 				gene.aseq_id = 'wTCio8ibKOlaJ_LDGhkSVA'
 				return genes.addAseqInfo([gene], {keepGoing: false}).should.be.rejectedWith('not found')
 			})
 		})
 		it('should reject if aseq is null', function() {
 			const genes = new Genes()
-			const geneVersion = 'GCF_000302455.1-A994_RS01985'
-			return genes.info(geneVersion).then((gene) => {
+			const stableId = 'GCF_000302455.1-A994_RS01985'
+			return genes.info(stableId).then((gene) => {
 				gene.aseq_id = null
 				return genes.addAseqInfo([gene], {keepGoing: false}).should.be.rejectedWith('has null aseq')
 			})
 		})
 		it('should pass (with warning) null if aseq_id is null and told to keep going', function() {
 			const genes = new Genes()
-			const geneVersion = 'GCF_000302455.1-A994_RS01985'
-			return genes.info(geneVersion).then((gene) => {
+			const stableId = 'GCF_000302455.1-A994_RS01985'
+			return genes.info(stableId).then((gene) => {
 				gene.aseq_id = null
 				return genes.addAseqInfo([gene], {keepGoing: true}).then((results) => {
 					expect(results[0].ai).to.be.null
@@ -303,8 +303,8 @@ describe('Genes', function() {
 		})
 		it('should warns if gene is not found and asked to not throw error in options', function() {
 			const genes = new Genes()
-			const geneVersion = 'GCF_000302455.1-A994_RS01985'
-			return genes.info(geneVersion).then((gene) => {
+			const stableId = 'GCF_000302455.1-A994_RS01985'
+			return genes.info(stableId).then((gene) => {
 				gene.aseq_id = 'wTCio8ibKOlaJ_LDGhkSVA'
 				return genes.addAseqInfo([gene], {keepGoing: true}).then((results) => {
 					expect(results[0].ai).to.be.undefined

src/NodeMist3Abstract.js

@@ -1,16 +1,35 @@
 'use strict'
 
-let httpDefaultOptions = {
-	method: 'GET',
-	hostname: 'api.mistdb.com',
-	port: 5000,
+const https = require('https')
+
+const apiHostnameList = [
+	'api.mistdb.com',
+	'api.mistdb.caltech.edu'
+]
+
+const httpsDefaultOptions = {
 	headers: {},
 	agent: false
 }
 
 module.exports =
 class NodeMist3 {
 	constructor(options) {
-		this.httpOptions = options ? options : httpDefaultOptions
+		this.httpsOptions = options ? options : httpsDefaultOptions
+	}
+
+	init() {
+		httpsDefaultOptions.method = 'HEAD'
+		const requests = []
+		for (const apiHostname of apiHostnameList) {
+			httpsDefaultOptions.hostname = apiHostname
+			requests.push(https.request(httpsDefaultOptions))
+		}
+		return Promise.all(requests).then((responses) => {
+			for (const response of responses) {
+				console.log(response.statusCode)
+			}
+			return
+		})
 	}
 }

src/NodeMist3Abstract.tests.js

@@ -0,0 +1,18 @@
+'use strict'
+
+const chai = require('chai')
+const chaiAsPromised = require('chai-as-promised')
+
+chai.use(chaiAsPromised)
+
+const expect = chai.expect
+const should = chai.should()
+
+const NodeMist3Abstract = require('./NodeMist3Abstract')
+
+describe.only('NodeMist3Abstract', function() {
+	it('init should work', function() {
+		const abstract = new NodeMist3Abstract()
+		return abstract.init()
+	})
+})