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Multimer #6

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MaciejMajew opened this issue Feb 28, 2024 · 2 comments
Closed

Multimer #6

MaciejMajew opened this issue Feb 28, 2024 · 2 comments

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@MaciejMajew
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Hi! Great work!
Is multimer supported as in ESMFold?
I was trying to use a separation token ":" as in ESM but it doesn't seem to work.
@bjing2016
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We do not currently support ESM-style ":" tokens, but internally in ESMFold they are converted to linker sequences, which you can add manually. See https://github.com/facebookresearch/esm/blob/main/esm/esmfold/v1/misc.py#L18.
In the future we may add direct support for multimer inputs.

@MaciejMajew
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Thanks, I will try that solution for now.

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@bjing2016 @MaciejMajew