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revdep check
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bmaitner committed Dec 29, 2022
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54 changes: 16 additions & 38 deletions revdep/README.md
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# Platform

|field |value |
|:--------|:----------------------------|
|version |R version 3.6.2 (2019-12-12) |
|os |Windows 10 x64 |
|system |x86_64, mingw32 |
|ui |RStudio |
|language |(EN) |
|collate |English_United States.1252 |
|ctype |English_United States.1252 |
|tz |America/Phoenix |
|date |2020-02-25 |
|field |value |
|:--------|:------------------------------------|
|version |R version 4.2.2 (2022-10-31 ucrt) |
|os |Windows 10 x64 (build 17763) |
|system |x86_64, mingw32 |
|ui |RStudio |
|language |(EN) |
|collate |English_United States.1252 |
|ctype |English_United States.1252 |
|tz |America/New_York |
|date |2022-12-28 |
|rstudio |2021.09.0+351 Ghost Orchid (desktop) |
|pandoc |NA |

# Dependencies

|package |old |new |<U+0394> |
|:-------------|:-----|:-----------|:--|
|BIEN |1.2.3 |1.2.4 |* |
|ape |5.3 |5.3 | |
|classInt |NA |0.4-2 |* |
|DBI |1.1.0 |1.1.0 | |
|doParallel |NA |1.0.15 |* |
|e1071 |NA |1.7-3 |* |
|fasterize |NA |1.0.0 |* |
|foreach |NA |1.4.8 |* |
|iterators |NA |1.0.12 |* |
|magrittr |NA |1.5 |* |
|raster |NA |3.0-12 |* |
|Rcpp |1.0.3 |1.0.3 | |
|RcppArmadillo |NA |0.9.850.1.0 |* |
|rgdal |1.4-8 |1.4-8 | |
|rgeos |0.5-2 |0.5-2 | |
|RPostgreSQL |0.6-2 |0.6-2 | |
|sf |NA |0.8-1 |* |
|sp |1.4-0 |1.4-0 | |
|units |NA |0.6-5 |* |
|package |old |new |<U+0394> |
|:-------|:-----|:-----|:--|
|BIEN |1.2.5 |1.2.6 |* |

# Revdeps

## Failed to check (1)

|package |version |error |warning |note |
|:------------------|:-------|:-----|:-------|:----|
|rangeModelMetadata |? | | | |

2 changes: 2 additions & 0 deletions revdep/checks/libraries.csv
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package,old,new,delta
BIEN,1.2.5,1.2.6,*
200 changes: 200 additions & 0 deletions revdep/checks/rangeModelMetadata/new/libraries.txt
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Library: C:\Users\Brian Maitner\Desktop\current_projects\RBIEN/revdep/library/BIEN/new
BIEN (1.2.6)

Library: C:\Users\Brian Maitner\Desktop\current_projects\RBIEN/revdep/library/rangeModelMetadata
abind (1.4-5)
ade4 (1.7-20)
adehabitatHR (0.4.20)
adehabitatLT (0.3.26)
adehabitatMA (0.3.15)
ape (5.6-2)
askpass (1.1)
assertthat (0.2.1)
backports (1.4.1)
base64enc (0.1-3)
BH (1.78.0-0)
biomod2 (4.1-2)
boot (1.3-28.1)
bslib (0.4.2)
cachem (1.0.6)
checkmate (2.1.0)
CircStats (0.2-6)
class (7.3-20)
classInt (0.4-8)
cli (3.5.0)
cluster (2.1.4)
codetools (0.2-18)
colorspace (2.0-3)
commonmark (1.8.1)
conditionz (0.1.0)
cpp11 (0.4.3)
crayon (1.5.2)
crul (1.3)
curl (4.3.3)
data.table (1.14.6)
DBI (1.1.3)
deldir (1.0-6)
digest (0.6.31)
dismo (1.3-9)
doParallel (1.0.17)
dotCall64 (1.0-2)
dplyr (1.0.10)
e1071 (1.7-12)
earth (5.3.1)
ecodist (2.0.9)
ecospat (3.4)
ellipsis (0.3.2)
evaluate (0.19)
fansi (1.0.3)
farver (2.1.1)
fasterize (1.0.4)
fastmap (1.1.0)
fields (14.1)
FNN (1.1.3.1)
fontawesome (0.4.0)
foreach (1.5.2)
foreign (0.8-84)
Formula (1.2-4)
fs (1.5.2)
gbm (2.1.8.1)
generics (0.1.3)
ggplot2 (3.4.0)
glmnet (4.1-6)
glue (1.6.2)
goftest (1.2-3)
gridExtra (2.3)
gtable (0.3.1)
gtools (3.9.4)
highr (0.10)
Hmisc (4.7-2)
htmlTable (2.4.1)
htmltools (0.5.4)
htmlwidgets (1.6.0)
httpcode (0.3.0)
httpuv (1.6.7)
httr (1.4.4)
interp (1.1-3)
isoband (0.2.7)
iterators (1.0.14)
jpeg (0.1-10)
jquerylib (0.1.4)
jsonlite (1.8.4)
kernlab (0.9-31)
KernSmooth (2.23-20)
knitr (1.41)
ks (1.14.0)
labeling (0.4.2)
later (1.3.0)
lattice (0.20-45)
latticeExtra (0.6-30)
lazyeval (0.2.2)
lifecycle (1.0.3)
lubridate (1.9.0)
magrittr (2.0.3)
mapproj (1.2.9)
maps (3.4.1)
maptools (1.1-6)
MASS (7.3-58.1)
Matrix (1.5-3)
matrixStats (0.63.0)
maxnet (0.1.4)
mclust (6.0.0)
mda (0.5-3)
memoise (2.0.1)
mgcv (1.8-41)
mime (0.12)
misc3d (0.9-1)
multicool (0.1-12)
munsell (0.5.0)
mvtnorm (1.1-3)
nabor (0.5.0)
nlme (3.1-161)
nnet (7.3-18)
oai (0.4.0)
openssl (2.0.5)
permute (0.9-7)
pillar (1.8.1)
pixmap (0.4-12)
pkgconfig (2.0.3)
plot3D (1.4)
plotmo (3.6.2)
plotrix (3.8-2)
plyr (1.8.8)
png (0.1-8)
poibin (1.5)
polyclip (1.10-4)
pracma (2.4.2)
PresenceAbsence (1.1.10)
pROC (1.18.0)
promises (1.2.0.1)
proxy (0.4-27)
R6 (2.5.1)
randomForest (4.7-1.1)
rappdirs (0.3.3)
raster (3.6-11)
rbison (1.0.0)
RColorBrewer (1.1-3)
Rcpp (1.0.9)
RcppArmadillo (0.11.4.2.1)
RcppEigen (0.3.3.9.3)
rebird (1.3.0)
reshape (0.8.9)
reshape2 (1.4.4)
rgbif (3.7.4)
rgdal (1.6-3)
rgeos (0.6-1)
ridigbio (0.3.6)
rlang (1.0.6)
rmarkdown (2.19)
rpart (4.1.19)
RPostgreSQL (0.7-4)
rstudioapi (0.14)
rvertnet (0.8.2)
s2 (1.1.1)
sass (0.4.4)
scales (1.2.1)
sf (1.0-9)
shape (1.4.6)
shiny (1.7.4)
sourcetools (0.1.7)
sp (1.5-1)
spam (2.9-1)
spatstat (3.0-2)
spatstat.data (3.0-0)
spatstat.explore (3.0-5)
spatstat.geom (3.0-3)
spatstat.linnet (3.0-3)
spatstat.model (3.0-2)
spatstat.random (3.0-1)
spatstat.sparse (3.0-0)
spatstat.utils (3.0-1)
spocc (1.2.0)
spThin (0.2.0)
stringi (1.7.8)
stringr (1.5.0)
survival (3.4-0)
sys (3.4.1)
TeachingDemos (2.12)
tensor (1.5)
terra (1.6-47)
tibble (3.1.8)
tidyselect (1.2.0)
timechange (0.1.1)
tinytex (0.43)
triebeard (0.3.0)
units (0.8-1)
urltools (1.7.3)
utf8 (1.2.2)
uuid (1.1-0)
vctrs (0.5.1)
vegan (2.6-4)
viridis (0.6.2)
viridisLite (0.4.1)
wellknown (0.7.4)
whisker (0.4.1)
withr (2.5.0)
wk (0.7.1)
xfun (0.36)
xml2 (1.3.3)
xtable (1.8-4)
yaml (2.3.6)
63 changes: 63 additions & 0 deletions revdep/checks/rangeModelMetadata/new/rangeModelMetadata.Rcheck/00check.log
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* using log directory 'C:/Users/Brian Maitner/Desktop/current_projects/RBIEN/revdep/checks/rangeModelMetadata/new/rangeModelMetadata.Rcheck'
* using R version 4.2.2 (2022-10-31 ucrt)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using options '--no-manual --no-build-vignettes'
* checking for file 'rangeModelMetadata/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'rangeModelMetadata' version '0.1.4'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Package suggested but not available for checking: 'googlesheets'
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'rangeModelMetadata' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
'MASS' 'dplyr' 'jsonlite' 'rgbif' 'rgdal' 'rgeos' 'sp' 'spThin'
'spatstat'
All declared Imports should be used.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... NONE
'rmm_Multispecies.Rmd' using 'UTF-8'... OK
'rmm_directory.Rmd' using 'UTF-8'... OK
'rmm_vignette.Rmd' using 'UTF-8'... OK
* checking re-building of vignette outputs ... SKIPPED
* DONE
Status: 2 NOTEs
14 changes: 14 additions & 0 deletions revdep/checks/rangeModelMetadata/new/rangeModelMetadata.Rcheck/00install.out
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* installing *source* package 'rangeModelMetadata' ...
** package 'rangeModelMetadata' successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rangeModelMetadata)
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