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Crinet (CeRna Interaction NETwork)

Crinet: A computational tool to infer genome-wide competing endogenous RNA (ceRNA) interactions and groups

To learn more about Crinet, read our paper at: https://journals.plos.org/plosone/article/authors?id=10.1371/journal.pone.0251399

Description of files

crinet.R

The script that runs Crinet with default hyperparameters and sample dataset with 10 cores.

To change the datasets, modify line 5. To change the hyperparameters, modify line 11.

CRINET_sample.rda

Supplemental file including sample datasets used in Crinet.

crinet.functions.R

Supplemental file including function declarations used by Crinet

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Competing endogenous RNA (ceRNA) network inference tool

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