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in bio-playground/reads-utils/guess-encoding.py, FASTQ range for Sanger should be (33, 73) instead of (33, 93) #10

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anarkia7115 opened this issue Aug 12, 2016 · 1 comment
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in bio-playground/reads-utils/guess-encoding.py, FASTQ range for Sanger should be (33, 73) instead of (33, 93) #10

anarkia7115 opened this issue Aug 12, 2016 · 1 comment

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From wiki about FASTQ Phred Range(https://en.wikipedia.org/wiki/FASTQ_format), it says that the standard of Sanger Phred+33 has the lower bound of 33 and the upper bound of 73. Narrow down the range may increase the guess speed.
@anarkia7115 anarkia7115 changed the title in guess_range.py, FASTQ range for Sanger should be (33, 73) instead of (33, 93) in bio-playground/reads-utils/guess-encoding.py, FASTQ range for Sanger should be (33, 73) instead of (33, 93) Aug 12, 2016
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solved

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