Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

compile error on importing hts #5

Open
monkollek opened this issue Dec 3, 2017 · 2 comments
Open

compile error on importing hts #5

monkollek opened this issue Dec 3, 2017 · 2 comments

Comments

@monkollek
Copy link

Running the compile command: nim c -d:release src/indelope

I'm getting the error
indelope.nim(13, 8) Error: cannot open 'hts'

due to the import hts command on https://github.com/brentp/indelope/blob/master/src/indelope.nim#L13

Looking at mosdepth as an example of an import of hts
https://github.com/brentp/mosdepth/blob/master/mosdepth.nim#L1-3

Should this be edited to e.g. import hts/bam or some name in the hts directory with a .nim file?

@brentp
Copy link
Owner

brentp commented Dec 3, 2017

hi, I had recently restructured hts to be more modular. I have just updated indelope master to reflect that change. thanks for reporting.

@monkollek
Copy link
Author

All good, compiler error regarding hts gone. thanks for the fast response!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants