Document field changes from Integer to Int in MCMC types.

doc/mcmc/chains.rst

@@ -25,7 +25,7 @@ Fields
 * ``value::Array{Float64,3}`` : a 3-dimensional array of sampled values whose first, second, and third dimensions index the iterations, parameter elements, and runs of an MCMC sampler, respectively.
 * ``range::Range{Int}`` : range of iterations stored in the rows of the ``value`` array.
 * ``names::Vector{String}`` : names assigned to the parameter elements.
-* ``chains::Vector{Integer}`` : indices to the MCMC runs.
+* ``chains::Vector{Int}`` : indices to the MCMC runs.
 * ``model::Model`` : the model from which the sampled values were generated (``ModelChain`` only).
 
 Constructors

doc/mcmc/dependent.rst

@@ -20,7 +20,7 @@ Fields
 
 * ``value::T`` : a scalar or array of ``Float64`` values that represent samples from a target distribution.
 * ``symbol::Symbol`` : an identifying symbol for the node.
-* ``linklength::Integer`` : number of elements returned by the ``link`` method defined on the type.  Generally, this will be the number of unique elements in the node.  In most cases, ``linklength`` will be equal to ``length(value)``.  However, for some structures, like stochastic covariance matrices, ``linklength`` may be smaller.
+* ``linklength::Int`` : number of elements returned by the ``link`` method defined on the type.  Generally, this will be the number of unique elements in the node.  In most cases, ``linklength`` will be equal to ``length(value)``.  However, for some structures, like stochastic covariance matrices, ``linklength`` may be smaller.
 * ``monitor::Vector{Int}`` : indices identifying elements of the ``value`` field to include in monitored MCMC sampler output.
 * ``eval::Function`` : a function for updating the state of the node.
 * ``sources::Vector{Symbol}`` : symbols of other nodes upon whom the values of this one depends.
@@ -126,7 +126,7 @@ Fields
 
 * ``value`` : values of type ``Float64`` for ``ScalarLogical`` nodes and ``Array{Float64}`` for ``ArrayLogical`` nodes that represent samples from a target distribution.
 * ``symbol::Symbol`` : an identifying symbol for the node.
-* ``linklength::Integer`` : number of elements returned by the ``link`` method defined on the type.
+* ``linklength::Int`` : number of elements returned by the ``link`` method defined on the type.
 * ``monitor::Vector{Int}`` : indices identifying elements of the ``value`` field to include in monitored MCMC sampler output.
 * ``eval::Function`` : a function for updating values stored in ``value``.
 * ``sources::Vector{Symbol}`` : symbols of other nodes upon whom the values of this one depends.
@@ -217,7 +217,7 @@ Fields
 
 * ``value`` : values of type ``Float64`` for ``ScalarStochastic`` nodes and ``Array{Float64}`` for ``ArrayStochastic`` nodes that represent samples from a target distribution.
 * ``symbol::Symbol`` : an identifying symbol for the node.
-* ``linklength::Integer`` : number of elements returned by the ``link`` method defined on the type.
+* ``linklength::Int`` : number of elements returned by the ``link`` method defined on the type.
 * ``monitor::Vector{Int}`` : indices identifying elements of the ``value`` field to include in monitored MCMC sampler output.
 * ``eval::Function`` : a function for updating the ``distr`` field for the node.
 * ``sources::Vector{Symbol}`` : symbols of other nodes upon whom the distributional specification for this one depends.

doc/mcmc/model.rst

@@ -19,9 +19,9 @@ Fields
 * ``dependents::Vector{Symbol}`` : symbols of all ``Dependent`` nodes in topologically sorted order so that a given node in the vector is conditionally independent of subsequent nodes, given the previous ones.
 * ``samplers::Vector{Sampler}`` : sampling functions for updating blocks of stochastic nodes.
 * ``states::Vector{Vector{Float64}}`` : states of chains at the end of a possible series of MCMC runs.
-* ``iter::Integer`` : current MCMC draw from the target distribution.
-* ``burnin::Integer`` : number of initial draws to discard as a burn-in sequence to allow for convergence.
-* ``chain::Integer`` : current run of an MCMC simulator in a possible series of runs.
+* ``iter::Int`` : current MCMC draw from the target distribution.
+* ``burnin::Int`` : number of initial draws to discard as a burn-in sequence to allow for convergence.
+* ``chain::Int`` : current run of an MCMC simulator in a possible series of runs.
 * ``hasinputs::Bool`` : whether values have been assigned to the input nodes.
 * ``hasinits::Bool`` : whether initial values have been assigned to stochastic nodes.