Updated how Cells and Populations get neighbors. Prevents Cells from …

…needing to know about nodes.

Updated to version 1.0.12

scripts/runseeds.py

@@ -9,7 +9,7 @@
 """
 
 __author__ = "Brian Connelly <bdc@msu.edu>"
-__version__ = "1.0.11"
+__version__ = "1.0.12"
 __credits__ = "Brian Connelly"
 
 import seeds as S

seeds/Cell.py

@@ -123,7 +123,7 @@ def remove_neighbor(self, neighbor):
 
     def get_neighbors(self):
         """Get a list of neighboring cells"""
-        return [self.population.topology.graph.node[n]['cell'] for n in self.population.topology.get_neighbors(self.node)]
+        return self.population.get_neighbors(self)
 
     def update_neighbors(self):
         """Update the list of neighboring cells"""

seeds/Population.py

@@ -304,3 +304,7 @@ def disconnect_cells(self, src, dest):
     def get_cell_id(self):
         """Return a unique ID to be used for a Cell"""
         return self.cell_id_manager.next()
+
+    def get_neighbors(self, cell):
+        """Return a list of the neighbors for the given cell"""
+        return [self.topology.graph.node[n]['cell'] for n in self.topology.get_neighbors(cell.node)]

seeds/Resource.py

@@ -264,4 +264,3 @@ def resourcetpye_distance(self, src, dest):
         """
 
         return self.topology.node_distance(src.id, dest.id)
-

seeds/__init__.py

@@ -1,5 +1,5 @@
 # -*- coding: utf-8 -*-
-VERSION = (1, 0, 11)
+VERSION = (1, 0, 12)
 __version__ = ".".join(map(str, VERSION[0:3])) + "".join(VERSION[3:])
 __license__ = "Apache Version 2"
 __download_url__ = "https://github.com/downloads/briandconnelly/seeds/seeds-%s.tar.gz" % (__version__)