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Transcript not seen in results #6
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Hi @JohmaChroc , thanks for reporting this issue. My current set of GRCh38 annotations includes 176,560 transcripts, and excludes the follow transcripts by type:
Since you (and probably others) want to see some of these, I'll try adding all transcripts. |
A follow up question: Is there any difference with the included transcripts for GRCh37/hg19? |
There's no difference in how SpliceAI-lookup treats GRCh37 and GRCh38 transcripts. Also, even after showing all non-coding transcripts,
This transcript was quite different in the earlier
|
Hi,
Results for my gene transcript of interest (ENST00000450313) are not being displayed whereas results for other transcripts for the same gene are. Is there a limit on the number of transcripts displayed in the results output? If so, is there a way of selecting a specific gene transcript for analysis? The impacted exon in question is present in the majority of transcripts so I may expect to see somewhat similar results (the exon in my transcript is concordant with the gnomAD canonical transcript - ENST00000372098). Thank you in advance.
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