Rawls service for DSDE
Diabetes portal for the Medical Population Genetics department at the Broad Institute
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
GATK4 development of the license-protected part of the toolkit
Workflow Execution Engine using WDL
Cromwell integration testing environment
Component of the Broad-based gray team to the NCATS Biomedical translator
It's a methods repository!
FireCloud user interface for web browsers.
Scala bindings for WDL
Workflow Description Language - Specification and Implementations
A simple service to store arbitrary key/value pairs
FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine
Python and UNIX CLI utilities to simplify interaction with the NIH/NCI Genomics Data Commons
Composite of Multiple Signals: tests for selection in meiotically recombinant populations
DSDE Deep Learning Club
Utilities to help algorithm developers dockerize new tasks, debug them, and put them into Firecloud.
Viral genomics analysis pipelines
Deployment files related to https://github.com/broadinstitute/viral-ngs
Manage rsyslog through puppet