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Broad Institute

Broad Institute of MIT and Harvard

Pinned repositories

  1. Official code repository for GATK versions 4 and up

    Java 936 378

  2. A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

    Java 627 299

  3. Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

    Scala 617 224


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