Increase minimum scikit-bio version

broadinstitute · Jan 11, 2023 · 50fbed1 · 50fbed1
1 parent d663912
commit 50fbed1
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Showing 2 changed files with 4 additions and 4 deletions.
diff --git a/environment.yml b/environment.yml
@@ -6,10 +6,10 @@ channels:
 dependencies:
     - "python>=3.7"
     - pybind11
-    - "scikit-bio>=0.5"
+    - "scikit-bio>=0.5.8"
     - "scikit-learn>=0.24"
     - numpy
-    - "scipy<1.9"
+    - scipy
     - h5py
     - matplotlib
     - pysam

diff --git a/setup.py b/setup.py
@@ -147,11 +147,11 @@ def build_extensions(self):
     ],
     install_requires=[
         'numpy',
-        'scipy<1.9',
+        'scipy',
         'h5py',
         'intervaltree',
         'matplotlib',
-        'scikit-bio>=0.5',
+        'scikit-bio>=0.5.8',
         'scikit-learn>=0.24',
         'pysam',
     ],