HHVtransmission

A workflowr project.

Website hosted here: bryanmayer.github.io/HHVtransmission

Order of analysis files:

1. setup-exposure-data.Rmd -> set up the data for analysis

2. general-statistics.Rmd -> statistics on incidence and household exposure data

3. setup-model-data.Rmd -> minimal additional data preparing for transmission model

4. transmission-risk-sensitivity.Rmd -> transmission model selection, diagnostics, and sensitivity

5. transmission-risk.Rmd -> analysis of final transmission model: risk predictions and dose-response