Merge pull request #58 from brycefrank/0.3.5

0.3.5
brycefrank · Sep 9, 2019 · 5d5b267 · 5d5b267
2 parents 0b9c8a9 + bb17f9c
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diff --git a/.travis.yml b/.travis.yml
@@ -1,12 +1,7 @@
 dist: xenial
 language: python
-branch:
-  only:
-    - master
-    - 0.2.1
-    - 0.3.0
 python:
-  - "3.6"
+  - "3.7"
 install:
   - sudo apt-get update
   - wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;

diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,3 +1,24 @@
+# 0.3.5
+
+Updates between April 20, 2019 and September 9, 2019
+
+A few small maintenance updates and implementation of `metrics`.
+
+## Cloud
+1. `.normalize` wrapper now allows for using already classified ground points with the `classified` argument.
+
+## Metrics
+1. Added metrics computations for `grid` objects
+2. Finalized the standard set of metrics for both `cloud` and `grid` objects via `standard_metrics_grid` and 
+`standard_metrics_cloud`
+
+## Raster
+1. `.watershed_seg` and `.local_maxima` were removed. Please see [treeseg](https://github.com/brycefrank/treeseg) for 
+new implementations of these methods.
+
+## Testing Suite
+1. Added tests for `Cloud.subtract`, `Raster.force_extent`.
+
 # 0.3.4 - Hotfixes
 
 Hotixes applied directly to `master` between April 20, 2019 and 0.4.0 release.

diff --git a/README.md b/README.md
@@ -16,11 +16,11 @@ memory optimized API for managing large collections of tiles.
 
 ## Release Status
 
-Current Release: 0.3.4
+Current Release: 0.4.0
 
-Release Date: April 20, 2019
+Release Date: []
 
-Release Status: 0.3 is an adolescent LiDAR data processing package adequate for single tile processing and large acqusitions.
+Release Status: 0.4 is an adolescent LiDAR data processing package adequate for single tile processing and large acqusitions.
 
 ## What Does pyfor Do?
 

diff --git a/docs/api/modules.rst b/docs/api/modules.rst
@@ -5,3 +5,5 @@ pyfor
    :maxdepth: 4
 
    pyfor
+   pyfortest
+   setup
diff --git a/docs/api/pyfor.clip.rst b/docs/api/pyfor.clip.rst
@@ -2,6 +2,6 @@ pyfor.clip module
 =================
 
 .. automodule:: pyfor.clip
-    :members:
-    :undoc-members:
-    :show-inheritance:
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/api/pyfor.cloud.rst b/docs/api/pyfor.cloud.rst
@@ -2,6 +2,6 @@ pyfor.cloud module
 ==================
 
 .. automodule:: pyfor.cloud
-    :members:
-    :undoc-members:
-    :show-inheritance:
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/api/pyfor.collection.rst b/docs/api/pyfor.collection.rst
@@ -2,6 +2,6 @@ pyfor.collection module
 =======================
 
 .. automodule:: pyfor.collection
-    :members:
-    :undoc-members:
-    :show-inheritance:
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/api/pyfor.gisexport.rst b/docs/api/pyfor.gisexport.rst
@@ -2,6 +2,6 @@ pyfor.gisexport module
 ======================
 
 .. automodule:: pyfor.gisexport
-    :members:
-    :undoc-members:
-    :show-inheritance:
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/api/pyfor.ground_filter.rst b/docs/api/pyfor.ground_filter.rst
@@ -2,6 +2,6 @@ pyfor.ground\_filter module
 ===========================
 
 .. automodule:: pyfor.ground_filter
-    :members:
-    :undoc-members:
-    :show-inheritance:
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/api/pyfor.metrics.rst b/docs/api/pyfor.metrics.rst
@@ -2,6 +2,6 @@ pyfor.metrics module
 ====================
 
 .. automodule:: pyfor.metrics
-    :members:
-    :undoc-members:
-    :show-inheritance:
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/api/pyfor.rasterizer.rst b/docs/api/pyfor.rasterizer.rst
@@ -2,6 +2,6 @@ pyfor.rasterizer module
 =======================
 
 .. automodule:: pyfor.rasterizer
-    :members:
-    :undoc-members:
-    :show-inheritance:
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/api/pyfor.rst b/docs/api/pyfor.rst
@@ -19,6 +19,6 @@ Module contents
 ---------------
 
 .. automodule:: pyfor
-    :members:
-    :undoc-members:
-    :show-inheritance:
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/api/pyfor.voxelizer.rst b/docs/api/pyfor.voxelizer.rst
@@ -2,6 +2,6 @@ pyfor.voxelizer module
 ======================
 
 .. automodule:: pyfor.voxelizer
-    :members:
-    :undoc-members:
-    :show-inheritance:
+   :members:
+   :undoc-members:
+   :show-inheritance:
diff --git a/docs/html/.buildinfo b/docs/html/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: a4e7f1fa799e0c428422a0345904e9c6
+config: 8d31c8b1ae9d2c2d62d4bc9c3d430c12
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/docs/html/_static/basic.css b/docs/html/_static/basic.css
@@ -4,7 +4,7 @@
  *
  * Sphinx stylesheet -- basic theme.
  *
- * :copyright: Copyright 2007-2018 by the Sphinx team, see AUTHORS.
+ * :copyright: Copyright 2007-2019 by the Sphinx team, see AUTHORS.
  * :license: BSD, see LICENSE for details.
  *
  */
@@ -231,6 +231,16 @@ a.headerlink {
     visibility: hidden;
 }
 
+a.brackets:before,
+span.brackets > a:before{
+    content: "[";
+}
+
+a.brackets:after,
+span.brackets > a:after {
+    content: "]";
+}
+
 h1:hover > a.headerlink,
 h2:hover > a.headerlink,
 h3:hover > a.headerlink,
@@ -279,6 +289,12 @@ img.align-center, .figure.align-center, object.align-center {
   margin-right: auto;
 }
 
+img.align-default, .figure.align-default {
+  display: block;
+  margin-left: auto;
+  margin-right: auto;
+}
+
 .align-left {
     text-align: left;
 }
@@ -287,6 +303,10 @@ img.align-center, .figure.align-center, object.align-center {
     text-align: center;
 }
 
+.align-default {
+    text-align: center;
+}
+
 .align-right {
     text-align: right;
 }
@@ -358,6 +378,11 @@ table.align-center {
     margin-right: auto;
 }
 
+table.align-default {
+    margin-left: auto;
+    margin-right: auto;
+}
+
 table caption span.caption-number {
     font-style: italic;
 }
@@ -391,6 +416,16 @@ table.citation td {
     border-bottom: none;
 }
 
+th > p:first-child,
+td > p:first-child {
+    margin-top: 0px;
+}
+
+th > p:last-child,
+td > p:last-child {
+    margin-bottom: 0px;
+}
+
 /* -- figures --------------------------------------------------------------- */
 
 div.figure {
@@ -460,11 +495,58 @@ ol.upperroman {
     list-style: upper-roman;
 }
 
+li > p:first-child {
+    margin-top: 0px;
+}
+
+li > p:last-child {
+    margin-bottom: 0px;
+}
+
+dl.footnote > dt,
+dl.citation > dt {
+    float: left;
+}
+
+dl.footnote > dd,
+dl.citation > dd {
+    margin-bottom: 0em;
+}
+
+dl.footnote > dd:after,
+dl.citation > dd:after {
+    content: "";
+    clear: both;
+}
+
+dl.field-list {
+    display: grid;
+    grid-template-columns: fit-content(30%) auto;
+}
+
+dl.field-list > dt {
+    font-weight: bold;
+    word-break: break-word;
+    padding-left: 0.5em;
+    padding-right: 5px;
+}
+
+dl.field-list > dt:after {
+    content: ":";
+}
+
+dl.field-list > dd {
+    padding-left: 0.5em;
+    margin-top: 0em;
+    margin-left: 0em;
+    margin-bottom: 0em;
+}
+
 dl {
     margin-bottom: 15px;
 }
 
-dd p {
+dd > p:first-child {
     margin-top: 0px;
 }
 
@@ -537,6 +619,12 @@ dl.glossary dt {
     font-style: oblique;
 }
 
+.classifier:before {
+    font-style: normal;
+    margin: 0.5em;
+    content: ":";
+}
+
 abbr, acronym {
     border-bottom: dotted 1px;
     cursor: help;

diff --git a/docs/html/_static/css/badge_only.css b/docs/html/_static/css/badge_only.css