preparing to refactor for entire pipeline to be containerized (#2)

* preparing to refactor for entire pipeline to be containerized
note that I need to refactor spliced to not use any containers now!

Signed-off-by: vsoch <vsoch@users.noreply.github.com>
Co-authored-by: vsoch <vsoch@users.noreply.github.com>

.github/workflows/build-deploy.yaml

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+name: Build and Deploy containers
+
+on:
+  # Always test on pull request
+  pull_request: []
+
+  # Deploy on merge to main
+  push:
+    branches:
+      - main
+
+jobs:
+  deploy-test-containers:
+    runs-on: ubuntu-latest
+    name: Build Container
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v3
+
+      - name: Build Container
+        run: docker build -t ghcr.io/buildsi/spliced-experiment .
+
+      - name: Login and Deploy Test Container
+        if: (github.event_name != 'pull_request')
+        run: |
+          docker images
+          echo ${{ secrets.GITHUB_TOKEN }} | docker login ghcr.io -u ${{ secrets.GHCR_USERNAME }} --password-stdin
+          docker push ghcr.io/buildsi/spliced-experiment

.gitignore

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+*.sif
+.spack

Dockerfile

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+FROM ghcr.io/buildsi/libabigail:2.0
+
+# docker build -t ghcr.io/buildsi/spliced-experiment .
+# docker run -it -v /p/vast1/build/spliced-cache:/cache /p/vast1/build/spack:/spack ghcr.io/buildsi/spliced-experiment
+
+ENV DEBIAN_FRONTEND=noninteractive
+RUN apt-get update && apt-get install -y build-essential
+
+# always build with debug (this is in template script too)
+ENV SPACK_ADD_DEBUG_FLAGS=true
+
+# Always save to this cache (should be bound from the host)
+ENV SPLICED_SMEAGLE_CACHE_DIR=/cache
+ENV SPLICED_ABILAB_CACHE_DIR=/cache
+
+# Assume spack bound to /spack
+ENV PATH=/spack/bin:$PATH
+
+# Install cle (dependency of spliced)
+RUN git clone https://github.com/vsoch/cle && \
+    cd cle && \
+
+    # archinfo, pyvex, pyelftools, then cle
+    pip install wheel && \
+    pip install git+https://github.com/angr/archinfo && \
+    pip install git+https://github.com/angr/pyvex && \
+    pip install git+https://github.com/eliben/pyelftools && \
+    pip install .
+
+RUN pip install git+https://github.com/buildsi/spliced
+
+# Install abi-laboratory tools
+RUN git clone https://github.com/lvc/abi-dumper && \
+    cd abi-dumper && \
+    make install prefix=/usr && \
+    cd .. && \
+    git clone https://github.com/lvc/abi-compliance-checker && \
+    cd abi-compliance-checker && \
+    make install prefix=/usr
+
+# Install "nice to haves"
+RUN pip install ipython && apt-get install -y vim
+
+# Try installing spack to inside of container (and will bind install on outside)
+RUN git clone --depth 1 -b vsoch/db-17-splice-july-25 https://github.com/vsoch/spack /spack
+
+# Add scripts
+WORKDIR /code
+COPY . /code