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CD_IVC_differentials.tsv
CD_IVC_differentials.tsv
 
 
CD_IVC_differentials_viz.qzv
CD_IVC_differentials_viz.qzv
 
 
F1B_density.Rmd
F1B_density.Rmd
 
 
F1C_venn_diagram.Rmd
F1C_venn_diagram.Rmd
 
 
F3A_SES_location_analysis.ipynb
F3A_SES_location_analysis.ipynb
 
 
F3C_b_vulgatus_corr.Rmd
F3C_b_vulgatus_corr.Rmd
 
 
F3E_all_bile_acids.Rmd
F3E_all_bile_acids.Rmd
 
 
F3G_differentials_metaomic.Rmd
F3G_differentials_metaomic.Rmd
 
 
IBD200_songbird_metadata_20210420.txt
IBD200_songbird_metadata_20210420.txt
 
 
README.md
README.md
 
 
SES_correlations.Rmd
SES_correlations.Rmd
 
 
UC_vs_ileal_or_colonic.Rmd
UC_vs_ileal_or_colonic.Rmd
 
 
all_data_v2.txt
all_data_v2.txt
 
 
metagenome.qza
metagenome.qza
 
 
metagenome_diversity_stuff.ipynb
metagenome_diversity_stuff.ipynb
 
 
metagenome_shannon_viz.qzv
metagenome_shannon_viz.qzv
 
 
metagenome_summarize.qzv
metagenome_summarize.qzv
 
 
metegenome_beta_IBDvHC.qzv
metegenome_beta_IBDvHC.qzv
 
 
metegenome_beta_diagnosis.qzv
metegenome_beta_diagnosis.qzv
 
 
metegenome_beta_location.qzv
metegenome_beta_location.qzv
 
 
multiomics_EFS_set_maker.Rmd
multiomics_EFS_set_maker.Rmd
 
 

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IBD200

A general repository for scripts used to generate analysis for an upcoming manuscript

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Files associated with upcoming scientific manuscript

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