New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Fixes for mutation step #31

Merged

ao508 merged 2 commits into cBioPortal:master from zheins:gn-fix

Aug 5, 2019

Contributor

zheins commented Aug 4, 2019

Calls the ensembl api to liftover GRCh38 -> GRCh37 so that genome nexus can annotate.
Fixes the the way the writer extracts fields from AnnotatedRecord
Chromosome normalization fix
Signed-off-by: Zachary Heins zackheins@gmail.com

zheins added 2 commits

August 3, 2019 23:13


          Fixes for mutation step

Signed-off-by: Zachary Heins <zackheins@gmail.com>


          Merge branch 'master' into gn-fix

f31a0e9

ao508 approved these changes

View reviewed changes

ao508 merged commit 0eaf558 into cBioPortal:master

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment