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Review March 4 #1

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iamciera opened this issue Mar 5, 2019 · 1 comment
Open

Review March 4 #1

iamciera opened this issue Mar 5, 2019 · 1 comment

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@iamciera
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iamciera commented Mar 5, 2019

Ollie

Part 1

  • Include a bit more about why you decided to explore the idigbio database.
  • I really like this comment: "#Called it 'blessed' because it took hours of frustration to get here." It's funny. You should explain this cell a bit more though. What is going on here? What are these loops doing?

Part 2

  • I think you should introduce the map function a bit more and give a reason for why you are mapping all the bear specimens. Do you just want to get a broad overview of what is available? You can simply say that.
  • I would start looking at the species in the bear data or start looking in the MVZ and start finding patterns in that. You could ask a number of questions about this.
  • Overall this part of seems to be focusing on the idigbio python package. You could add a bit more about what this does, show more functionality.
@odowns
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odowns commented Mar 5, 2019

Things I want to look at:

  • Mapping with QGIS instead of on a jupyter notebook
  • Make a gif of collections through time: look at species that have gone extinct since collection began, species just discovered, and species which have been visibly impacted by global climate change
  • Statistical tests on the data...?
  • Use outside data about interactions, gene data
  • What other things can we do with the data? (what other information is stored in the json outputs that we can use?)
  • Do everything in R
  • Predicting location of next specimen - k nearest neighbors
  • Map specimens vs permit areas?
  • Map specimens vs countries with different rules about collections?
  • Write a nice function that gives a full report of a species
  • How to merge data with other data? use Arctos, movebank, ???
  • What does this data mean? How does it impact humanity? What are the human contexts? Ethics?
  • Pick a dataset and go from there

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