Skip to content

Issues: callahantiff/OMOP2OBO

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

19 Open 27 Closed
19 Open 27 Closed
Author
Filter by author
Label
Filter by label
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Milestones
Filter by milestone
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

TODO - Pubs+Presentation Task: Deposit versions in Zenodo to get citable DOI pubs+presentations
#74 opened Aug 6, 2022 by jmcmurry
@callahantiff
1
Harmonise OMOP mappings with boomer or a boomer-like approach?
#72 opened Jul 28, 2022 by matentzn
1
Work-around for NLTK download issues coding
#70 opened Mar 18, 2022 by chrisroederucdenver
@callahantiff
running without a mrconso file has an error‘ bug Something isn't working
#68 opened Mar 17, 2022 by chrisroederucdenver
1
@callahantiff
merge option fails with multiple bug Something isn't working
#65 opened Mar 17, 2022 by chrisroederucdenver
@callahantiff
1
Coding: add requirements.txt coding
#63 opened Mar 17, 2022 by chrisroederucdenver
@callahantiff
2
Coding: SSSOM Output coding
#62 opened Feb 24, 2022 by joeflack4
@callahantiff
11
Add vanity CLI coding enhancement New feature or request
#56 opened Jan 15, 2021 by cthoyt
1
@callahantiff
4
Generate OMOP2OBO Mappings to OHDSI Cohort Definitions enhancement New feature or request help wanted
#55 opened Jan 6, 2021 by callahantiff
@callahantiff @jmbanda
3
Create YouTube Demo other project organization
#48 opened Nov 19, 2020 by callahantiff OMOP2OBO Methods Manuscript
@callahantiff
Extension: Extend mapping to take advantage of existing UMLS mappings in ontologies enhancement New feature or request mapping other release v2.0 work related to v2.0
#46 opened Oct 12, 2020 by callahantiff
@callahantiff
Improve string delimiter detection in mapping pipline bug Something isn't working release v2.0 work related to v2.0
#45 opened Oct 9, 2020 by callahantiff
2 tasks
@callahantiff
1
Coding: Parallelize tf-idf cosine similarity code coding release v2.0 work related to v2.0
#42 opened Oct 5, 2020 by callahantiff
2 tasks
@callahantiff
Coding: Leverage OMOP CDM Ancestor Hierarchy Levels coding release v2.0 work related to v2.0
#41 opened Oct 4, 2020 by callahantiff
@callahantiff
Coding: Parallelize mapping aggregation results coding release v2.0 work related to v2.0
#36 opened Sep 20, 2020 by callahantiff
@callahantiff
Coding: Add RDF-ization code to convert mappings to RDF coding
#34 opened Sep 14, 2020 by callahantiff OMOP2OBO Methods Manuscript
1
@nicolevasilevsky @bill-baumgartner @callahantiff
23
TODO: Mapping Release Formatting other
#30 opened Jul 23, 2020 by callahantiff OMOP2OBO Methods Manuscript
@callahantiff
1
Coding: Creating Mapping Testing Pipeline coding release v2.0 work related to v2.0
#19 opened Feb 2, 2020 by callahantiff
3 tasks done
@callahantiff @SteeleRobert
2
TODO - Draft the OMOP2OBO Mapping Manuscript pubs+presentations
#18 opened Dec 3, 2019 by callahantiff
2 tasks
OMOP2OBO Methods Manuscript
@callahantiff
ProTip! Mix and match filters to narrow down what you’re looking for.