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@cancerdatasci

Cancer Data Science at Broad Institute

Using machine learning to fight cancer since 2013

Popular repositories Loading

  1. ceres ceres Public

    Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens

    R 27 14

  2. demeter2 demeter2 Public

    Inference of gene dependency from RNAi screening datasets.

    R 18 13

  3. atlantis atlantis Public

    Code used for biomarker discovery using party (building conditional random forests)

    R 12 7

  4. demeter demeter Public

    Deconvolution of seed effects from gene effects in large scale RNAi screens

    R 10 4

  5. WRN_manuscript WRN_manuscript Public

    Analysis code from the manuscript "WRN Helicase is a Synthetic Lethal Target in Microsatellite Unstable Cancers"

    R 9 1

  6. ceres-manuscript ceres-manuscript Public

    Analysis code for CERES manuscript (Meyers, Bryan, et al. Nature Genetics. 2017)

    R 5

Repositories

Showing 6 of 6 repositories
  • demeter2 Public

    Inference of gene dependency from RNAi screening datasets.

    cancerdatasci/demeter2’s past year of commit activity
    R 18 BSD-3-Clause 13 2 0 Updated Apr 9, 2020
  • WRN_manuscript Public

    Analysis code from the manuscript "WRN Helicase is a Synthetic Lethal Target in Microsatellite Unstable Cancers"

    cancerdatasci/WRN_manuscript’s past year of commit activity
    R 9 1 0 0 Updated Mar 26, 2019
  • ceres Public

    Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens

    cancerdatasci/ceres’s past year of commit activity
    R 27 BSD-3-Clause 14 11 0 Updated Mar 21, 2019
  • atlantis Public

    Code used for biomarker discovery using party (building conditional random forests)

    cancerdatasci/atlantis’s past year of commit activity
    R 12 BSD-3-Clause 7 2 0 Updated May 18, 2018
  • demeter Public

    Deconvolution of seed effects from gene effects in large scale RNAi screens

    cancerdatasci/demeter’s past year of commit activity
    R 10 BSD-3-Clause 4 0 0 Updated May 18, 2018
  • ceres-manuscript Public

    Analysis code for CERES manuscript (Meyers, Bryan, et al. Nature Genetics. 2017)

    cancerdatasci/ceres-manuscript’s past year of commit activity
    R 5 0 0 0 Updated Nov 16, 2017

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