D. pseudoobscura data analysis pipeline

Detailed data analysis for our paper

• Selection on the fly: short term adaptation to an altered sexual selection regime in Drosophila pseudoobscura

You can find our preprint on bioRxiv: https://doi.org/10.1101/2022.03.16.484639

Mapping and variant calling

This section includes raw read mapping, variant calling and filtering.

SNP analysis

This section includes genetic diversity and effective population size estimation, as well as selection inference on individual allele frequency trajectories.

Annotation analysis

This section includes our analysis on potential candidate genes and intergenic regions.