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Update 09-configuration.md fixes #151
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fixes #151
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ggrimes committed Jun 10, 2024
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Expand Up @@ -697,6 +697,9 @@ run software using a privileged user. This can cause issues,
and so it is also a good idea to supply your user and group
via the `docker.runOptions`.

The Docker run option `-u $(id -u):$(id -g)` is used to specify the user and group IDs (UID and GID) that the container should use when running.
This option ensures that the processes inside the container run with the same UID and GID as the user executing the Docker command on the host system.

```groovy
process.container = 'quay.io/biocontainers/salmon:1.5.2--h84f40af_0'
docker.enabled = true
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