swcarpentry/r-novice-gapminder-es

[zkamvar]

tracking issue for https://github.com/swcarpentry/r-novice-gapminder-es

• build error due to stray .r class item (to be fixed in remove un-needed {: .r} tag swcarpentry/r-novice-gapminder-es#136)
• build error due to stray index and references (to be fixed in Remove duplicate files swcarpentry/r-novice-gapminder-es#141)

  Error in vapply(episodes, get_titles, character(1)) : 
    values must be length 1,
   but FUN(X[[17]]) result is length 0

• fix glossary definition list
• fix missing file in reference.md titles (04-Estructura-de-datos-parte1/ and 05-Estructura-de-datos-parte2/)
• fix renv errors
• fix link in instructor notes to main lesson gapminder data

renv error details

/home/zhian/Documents/Carpentries/Git/carpentries/lesson-transition/sandpaper/swcarpentry/r-novice-gapminder-es/episodes/06-data-subsetting.Rmd
-----------------------------------------------------------------------------------------------------------------------------------------------

ERROR 1: <text>:103:1: unexpected '<'
102: 
103: <
     ^

/home/zhian/Documents/Carpentries/Git/carpentries/lesson-transition/sandpaper/swcarpentry/r-novice-gapminder-es/episodes/13-dplyr.Rmd
-------------------------------------------------------------------------------------------------------------------------------------

ERROR 1: <text>:207:1: unexpected '>'
206: 
207: >
     ^

/home/zhian/Documents/Carpentries/Git/carpentries/lesson-transition/sandpaper/swcarpentry/r-novice-gapminder-es/episodes/15-knitr-markdown.Rmd
----------------------------------------------------------------------------------------------------------------------------------------------

ERROR 1: <text>:1:11: unexpected '\\'
1: round(some\

Build error details

── Reading in lesson with pegboard ─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
could not find _episodes/, using _episodes_rmd/ as the source
Error in `purrr::map()`:
ℹ In index: 7.
ℹ With name: /home/zhian/Documents/Carpentries/Git/carpentries/lesson-transition/swcarpentry/r-novice-gapminder-es/_episodes_rmd/07-control-flow.Rmd.
Caused by error in `purrr::map()`:
ℹ In index: 5.
Caused by error in `xml_nodeset()`:
! Expecting an external pointer: [type=NULL]
Backtrace:
     ▆
  1. ├─pegboard::Lesson$new(old, fix_liquid = arguments$fix_liquid)
  2. │ └─pegboard (local) initialize(...)
  3. │   └─pegboard:::read_jekyll_episodes(path, rmd, ...)
  4. │     └─pegboard:::read_markdown_files(rmd_src, sandpaper = FALSE, ...)
  5. │       └─purrr::map(the_episodes, Episode$new, ...)
  6. │         └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
  7. │           ├─purrr:::with_indexed_errors(...)
  8. │           │ └─base::withCallingHandlers(...)
  9. │           ├─purrr:::call_with_cleanup(...)
 10. │           └─R6 (local) .f(.x[[i]], ...)
 11. │             └─pegboard (local) initialize(...)
 12. │               └─purrr::map(blocks, set_ktag_block)
 13. │                 └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
 14. │                   ├─purrr:::with_indexed_errors(...)
 15. │                   │ └─base::withCallingHandlers(...)
 16. │                   ├─purrr:::call_with_cleanup(...)
 17. │                   └─pegboard (local) .f(.x[[i]], ...)
 18. │                     ├─parents[tag]
 19. │                     └─xml2:::`[.xml_nodeset`(parents, tag)
 20. │                       └─xml2:::xml_nodeset(NextMethod())
 21. └─base::.handleSimpleError(...)
 22.   └─purrr (local) h(simpleError(msg, call))
 23.     └─cli::cli_abort(...)
 24.       └─rlang::abort(...)
Execution halted

[zkamvar]

This was fixed in b7ae1c9