simulate cryo-EM tomograms of molecular mixtures
Preprint article: https://doi.org/10.1101/2023.04.28.538636
requirements:
MATLAB version 2019b or later
Matlab toolboxes: image processing, statistics and machine learning
EMIODist tools for .mrc read/write functions from https://github.com/rbehrouzi/emtoolbox
IMOD from https://bio3d.colorado.edu/imod/
Optionally uses uipickfiles for improved loading of multiple files - allows loading from multiple different folders and loading a file multiple times https://www.mathworks.com/matlabcentral/fileexchange/10867-uipickfiles-uigetfile-on-steroids
Installation Extract the downloaded release and move the folder into your matlab toolbox directory, and then add the /cryotomosim folder to your matlab search path.
Tested on Win10, Ubuntu 22.04, and Mac.